Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1280 ATGGGATCTTCAATGAGTTGCTGTGGCACAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGTGCAGTTAACAATTCATGGAGAATATTCTCATACAAGGAGTTGCATGCAGCTACCAATGGATTCAGTGAGGATAATAAACTTGGTGAAGGTGGTTTTGGAAGTGTCTATTGGGGAAGAACCAGTGATGGGTTCCAGATAGCAGTGAAGAAACTAAAAGCAATAAACTCAAAGGCAGAGATGGAATTTGCAGTAGAAGTTGAAGTTCTTGGAAGAGTTAGGCACAAAAATTTACTAGGCCTTAGGGGTTATTGTGCTGGGGATGATCAAAGGCTTATAGTCTATGATTACATGCCAAATCTGAGTCTGCTTTCTCATCTTCATGGCCAATTTTCTCTTGAAGTCCAACTTGACTGGAAAAGGAGAATTAAGATTGCAATTGGCTCTGCCCAAGGCATATTTTACTTGCATCATGAGGCAACACCCCACATCATCCATAGGGACATAAAGGCAAGTAATGTGCTTCTGAATTCAGATTTTGAGCCACTAGTTGCTGATTTTGGGTTTGCAAAGCTAATCCCAGATGGAGTTAGCCACATGACTACCCGTGTTAAGGGCACCTTGGGATACTTAGCACCTGAATATGCCATGTGGGGAAAAGTCTCTGAAAGTTGTGATGTCTTTAGCTTTGGAATTCTTCTATTGGAGCTTGTCACTGGAAGAAAGCCCATAGAAAAACTCCCTGGTGGAGTTAAGAGAACAATAACCCAGTGGGCCGAGCCTTTTATAACCAAAGGAAAGTTTAGGGATATGGTTGACCCAAAACTGAGAGGGAACTTTGATGAAAATCAAGTCATACAAACAATCAATGTAGCTGCTCTTTGTGTGCAAAGTGAGGCTGAGAAGCGACCAAATATGAAGCAAGTGGTGAACCTTCTCAAAGGGTATGAAGCTGATAGAGAAGTGACTAGGACAAGGATACATAGTATTGTTTATAATGATGAACTATTGACACAGGATGAGCCTAGTGATGATGAGGGTGGTGGAACTAATAGCTATGGTGTTTTAAATGCCATTCAGGTACAAAAAATGCATGATCCTTACAAGCCCAGTGATATCAAGTAA 1125 0.4133 MGSSMSCCGTEKVEEVPTSFGAVNNSWRIFSYKELHAATNGFSEDNKLGEGGFGSVYWGRTSDGFQIAVKKLKAINSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGDDQRLIVYDYMPNLSLLSHLHGQFSLEVQLDWKRRIKIAIGSAQGIFYLHHEATPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPDGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVFSFGILLLELVTGRKPIEKLPGGVKRTITQWAEPFITKGKFRDMVDPKLRGNFDENQVIQTINVAALCVQSEAEKRPNMKQVVNLLKGYEADREVTRTRIHSIVYNDELLTQDEPSDDEGGGTNSYGVLNAIQVQKMHDPYKPSDIK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1280 374 SUPERFAMILY Protein kinase-like (PK-like) 25 327 IPR011009 -
Lal19g1280 374 PANTHER OS01G0750732 PROTEIN 1 369 - -
Lal19g1280 374 Pfam Protein tyrosine and serine/threonine kinase 45 313 IPR001245 GO:0004672|GO:0006468
Lal19g1280 374 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1280 374 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Lal19g1280 374 CDD STKc_IRAK 48 315 - -
Lal19g1280 374 ProSiteProfiles Protein kinase domain profile. 42 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1280 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lal19g1280 374 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 369 - -
Lal19g1280 374 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Lal19g1280 374 Gene3D Transferase(Phosphotransferase) domain 1 118 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1280 Lal-Chr19 15913303 15915692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1280 1 309 Trihelix Transcription Factor Family AT1G68690 46.965 6.40e-95 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lal19g1280 PK_Tyr_Ser-Thr 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1280 - - gmx:100783365 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1280 19 15913303 15915692 Lal19g1280 19 15913303 15915692 ECH