Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1274 ATGCAGAGGCCAATAAGCGATTCAAATAGTAACAGTAAGGGGAAAAGGTCATTGGAGGGTGGTGAAGATGACCAGCCTGAACGAAAAAGACCCGCTCTTTCTAGGGGAGAGAGCAGTTGTCGGGATTCGACTTCATGCCCTGCAACTCTAGCAACTGAGCTGAACTTATATCTCCTTATAATTGATTCCAATGTGCTTTGCAGTGTAATTGTAGAAGCTCTCAAGGTGGACAGTTTGCAGAAATTTTGCTCATCTTTAGAACCTATTCTTCGTCGAGTTGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTCAGTGGAAGCAATGAAAATGGATATGAAGAAATTGAACCTGGAAATCATGTATGTATGTCTTCCCCAAAAACGATTGAAGGTCCGGATGGTAGAAACTTGCGGCTACATTTTAGGTCCCGACTGTCTCTTCCGCTGTTCACTGGAGGAAAAGTGGAAGGCGAACAGGGGGCTCCAGTTCATGTTGTTTTGATTGATGCCAATACTGGAAACATTGTAACATCTGGGCCTGAAGCCTACACGAAACTTGATGTTGTTGTCCTTGAAGGTGATTTTAATAATGAAGATGATGAAGATTGGACTCAAGAAGAATTTGAAAGCCATTTGGTGAAAGAACGCGAAGGAAAGAGACCTTTGTTGACTGGCGAATTGCAAGTGTCTCTCAAGGAAGGAATTGGAACGTTGGGGGAACTGACTTTTACAGACAATTCAAGCTGGATAAGGAGCCGAAAATTCAGGCTTGGCTTGAAGGTTGCACCAGGTTTTTGCGAATCCATACGCATTCGTGAAGCTAAGACATATGCTTTCACGGTTAAAGATCATAGAGGAGAACTATATAAGAAGCATTATCCTCCTGCTTTGAGTGATGAAGTTTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAGTAATGCTGGAATATTCACAGTTCAAGAATTCCTTCGGCTTGTGGTTAAAGATTCGCAAAATTTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGTGCTCTTAGATCATGCAAAGACCTGTGTCCTAACTGGAAAGCTTTATGTTTATTATCCAGAAGATACAAGAACCGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCTGCTGATTCGCTCAGTGATAGCCAGAAGGTTTATGTAGATTCTTTGGTGAAGAAGGCATATGAAAATTGGGATCAGGTTATAGAGTATGATGGTAAATCACTCGCAAGTGCTAAGGAAAATAATGTTGTAGCTGACGGTGAACTTGATATTGAGTCGATTAATTACTCTAGTGGTTTGGATGATCAACTGCATCTGCCACTCCCCCCAGCACCTGTTCTTTCTGAACAGCAAATGAATGCAGGGATGTTAATTGGAGGTTATAACGATCATATGGTAACAAGATATCCAAGCCAGCCACTGATAGCAAATTTCAACTCACGTAACCAGTTTGATAGCTCACTATATCTATCTAATGACCAATTAATCAACAGTGCCGAGCAAACCAAAACCACTAGAAATGGTCATGGTGCAGCTCTTGGTCCTCCTCAATCATCATCATCCTCGTCATCCTCATCATCACCAGGGTTTCATGTTGCCAGCTCTTCTATTCAACCATCTACTGTAAATCCTTTTGATGATTGGTCACACAACATGGACAAGGGGATCAATGAATTCTTTTCAGAGGATGAAATCCGCTTCAGAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCACTTGCTTCGCCTCCTCAGCATGGGAGCCCATTCCTCCATGAATGCTGAGGACAGCTATTCATTCCCATCCTTCATGCCATCACCTTTGCCAAACTTTGATGAGGGTCGCTCTCGTTCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCCGGAAGATTGCAGCTGCAAAGCGGGCACAAATAGAGGAGTTAGATGAATAA 2064 0.4278 MQRPISDSNSNSKGKRSLEGGEDDQPERKRPALSRGESSCRDSTSCPATLATELNLYLLIIDSNVLCSVIVEALKVDSLQKFCSSLEPILRRVVSEEVERALAKLGPARLSGSNENGYEEIEPGNHVCMSSPKTIEGPDGRNLRLHFRSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGNIVTSGPEAYTKLDVVVLEGDFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESIRIREAKTYAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKKLSNAGIFTVQEFLRLVVKDSQNLRNILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRTVGVIFNNIYELRGLITGEQFFSADSLSDSQKVYVDSLVKKAYENWDQVIEYDGKSLASAKENNVVADGELDIESINYSSGLDDQLHLPLPPAPVLSEQQMNAGMLIGGYNDHMVTRYPSQPLIANFNSRNQFDSSLYLSNDQLINSAEQTKTTRNGHGAALGPPQSSSSSSSSSSPGFHVASSSIQPSTVNPFDDWSHNMDKGINEFFSEDEIRFRSNEMLENEDMQHLLRLLSMGAHSSMNAEDSYSFPSFMPSPLPNFDEGRSRSGRAVVGWLKIKAAMRWGFFIRKIAAAKRAQIEELDE 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1274 687 Pfam Calmodulin binding protein C-terminal domain 373 435 IPR046829 -
Lal19g1274 687 Pfam Calmodulin binding protein central domain 303 368 IPR046830 -
Lal19g1274 687 Pfam Calmodulin binding protein-like N-terminal domain 143 290 IPR046831 -
Lal19g1274 687 MobiDBLite consensus disorder prediction 1 15 - -
Lal19g1274 687 PANTHER OS02G0177800 PROTEIN 7 686 IPR012416 GO:0005516
Lal19g1274 687 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 686 - -
Lal19g1274 687 MobiDBLite consensus disorder prediction 534 569 - -
Lal19g1274 687 MobiDBLite consensus disorder prediction 16 36 - -
Lal19g1274 687 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1274 Lal-Chr19 15874889 15881606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1274 6 682 Calmodulin-binding Proteins AT5G57580 60.231 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1274 - - cam:101488801 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1274 19 15874889 15881606 Lal19g1274 19 15874889 15881606 ECH
Lal7g1131 7 17206050 17211810 Lal19g1274 19 15874889 15881606 LSH