Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1269 ATGGAACATAAACATGATCATCATGAAGAGTTCTTTTTCCGTTCCAAACTCCCTAACATCTACATCCCAATTCACCTACCACTACACACTTACTGCTTCCAAAACCTATCTCAATTCAAAGACAAACCATGCATCATCAACAGCAACACCGGTGAGACATTCACTTATGCTGACGTAGAACTCACCGCCCGTAAAGTCGCCGCCGGTCTCAACAACCTTGGCATCAAACAAGGCGATGTCATACTCCTCCTTCTTCAGAATTGCCCACAATTCGTATTTTCATTCCTCGGAGCTTCCTACCTTGGCGCCATCACCACCACCGCCAACCCCTTTTATACATCGGCGGAGGTGGAAAAACAGCTCATCATAACACAATCCTCCTACGTTGAAAAAGTTAAGGATTTCGCGAGAGACTATAACATCAAAGTGGTGTGCATTGACGCGTCACCGGAGAATGAATACTTGCACTTCTCGGAGCTAACCTCCTCCGATGAGGATGATATCCCCGCAGTGAAAATCTCCCCGGACGACGTCGTTGCTTTGCCTTATTCCTCTGGCACGACGGGGCTTCCAAAAGGGGTGATGCTAACACACAAGGGGTTAGTTACAAGCGTGGCGCAACAAGTTGATGGTGAAAACCCTAATATTTATTTTCATAAGAACGACGTGATCCTTTGCGTTTTGCCACTTTTCCATATTTATGCACTTAACTCTGTTTTGCTATGTGGTCTTCGAGTTGGGGCTGCAATTTTGATAATGCAAAAGTTCGAAGTCACAACGTTGTTGGAGTTGATTGAGAAACATAAAGTGAGTATTGCGCCGTTTGTGCCGCCAATCGTTTTGGAAATAGCAAAGAGTGCTGATATGGAACGATACGACTTGTCGTCGATAAGGATGATTATGTCAGGTGCCGCACCCATGGGAAAGGATCTTGAGGAAGCTGTCAGGGTCAGGCTTCCTCACACCACACTTGGACAAGGTTATGGAATGACAGAAGCGGGACCAGTGCTATCAATGTGTTTAGCGTTTGCAAAGGAGCCATTTTTGGTGAAATCTGGTGCGTGCGGGACCGTAATAAGAAATGCAGAGATGAAGATCATTGACCCTGATACTGGCACTTCCCTTTTTAGGAATCAAGCTGGTGAGATTTGCATTAGAGGCAACCAGATCATGAAAGGTTACCTAAATGACCCAGAGGCCACAGAAAGAACTATAGACAAGGGGAAATGGTTGCACACAGGTGATATCGGTTATATTGATGATAATGATGAACTTTTCATTGTCGATCGATTAAAAGAACTAATCAAATATAAAGGATTTCAAGTTGCACCTGCTGAGCTTGAAGCCATGTTGATTGCTCACCCAAACATTGTTGATGCTGCTGTTGTATCCATGAAAGATGAAGCTGCAGGAGAGGTTCCAGTTGCATATGTTGTAAGGTCAATCAATTCTAAGATCTCAGAAGATGAAATCAAGCAATATATCTCAAAGCAGGTTGTGTTTTATAAAAGAATCAATAGGGTTTTCTTTGTGGACTTAATTCCAAAGGCACCCTCCGGCAAGATTTTGAGGAAAGAACTTAGGGCAAGGCTTACAGAAGGTCTTGCCGTTTAG 1614 0.4393 MEHKHDHHEEFFFRSKLPNIYIPIHLPLHTYCFQNLSQFKDKPCIINSNTGETFTYADVELTARKVAAGLNNLGIKQGDVILLLLQNCPQFVFSFLGASYLGAITTTANPFYTSAEVEKQLIITQSSYVEKVKDFARDYNIKVVCIDASPENEYLHFSELTSSDEDDIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNIYFHKNDVILCVLPLFHIYALNSVLLCGLRVGAAILIMQKFEVTTLLELIEKHKVSIAPFVPPIVLEIAKSADMERYDLSSIRMIMSGAAPMGKDLEEAVRVRLPHTTLGQGYGMTEAGPVLSMCLAFAKEPFLVKSGACGTVIRNAEMKIIDPDTGTSLFRNQAGEICIRGNQIMKGYLNDPEATERTIDKGKWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNIVDAAVVSMKDEAAGEVPVAYVVRSINSKISEDEIKQYISKQVVFYKRINRVFFVDLIPKAPSGKILRKELRARLTEGLAV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1269 537 CDD 4CL 22 527 - -
Lal19g1269 537 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 532 - -
Lal19g1269 537 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
Lal19g1269 537 Gene3D - 3 431 IPR042099 -
Lal19g1269 537 Pfam AMP-binding enzyme C-terminal domain 446 521 IPR025110 -
Lal19g1269 537 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 7 532 - -
Lal19g1269 537 Gene3D - 432 534 IPR045851 -
Lal19g1269 537 SUPERFAMILY Acetyl-CoA synthetase-like 8 533 - -
Lal19g1269 537 Pfam AMP-binding enzyme 34 437 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1269 Lal-Chr19 15856429 15862967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1269 2 499 Monolignol Biosynthesis Gene Families AT1G51680 67.251 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1269 K01904 - gmx:100779668 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1269 19 15856429 15862967 Lal19g1269 19 15856429 15862967 ECH
Lal14g1720 14 17263752 17269674 Lal19g1269 19 15856429 15862967 LSH
Lal7g1128 7 17189396 17192776 Lal19g1269 19 15856429 15862967 LSH