Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1265 ATGGATACTGATGAGGAGTGCACAATTGTTCTCGAGCTGTCTAAAAATGATCATTTCTTTGACGAAAAGAAGAAATTGCTACAAAGTAAGGGTTTTACTCCCAAGGAACATATATATCTCAGGAGCTCCATAAAGCCTGGTTGGATTAATGCTACTGTAAAGGTGTTACTTCAGATTGCACGAATCATACAGTTAAACGAGCTGGAACTTTATTTTGCTGAAGATGGTGCATGCACATCAGAGGAGTTTTACAGCCCTAGAAATGAGTTGGAGGCTCTAAATTCAATTGTTGTGCTGATTGACATATCACTTTCTAGTTGTACACATCTCCATACAAATATCCTGAAAGAGTTACGGGAAATAGTTATTCATTTAATTTCTGATTTTGGGGTCAAGAACAGTGTGAAGGGAGTAGTTGAAAGAGATTACACCTGTAATCAAGTACAAAGTCTGGTAGAATGGGGTGAAAGCAATGGTGTAAGGACACAGTTAAAGATATCTTATGTTGAAGGAGCAGGTCGGGGTGCGATAGCAAGGGAAGATCTAAAAGTTGGAGACGTTGCTTTAGAAATTCCACTGTCCATTATAATTTCGGAGGAACTTGTGTATGAAACTTATATGCATCGTGTCTTAAAAGAGGTTGATGGCATATCGTCTGAGACAATATTGCTGTTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAATTCTACTTTGATTCACTCCCAGAAAAATTTAATACAGGATTGAGTTTTGGCATCAAAGCAATCATGATGTTAGATGGAACTTTGCTGCTGGAAGAGATAATGCAAGCAAGAGAGCACCTGCGTGCTCAATATGATGAGTTGTTCCCTGCTCTATGCGATGCTTTTCCTGATATATTCCCACTAGAGCTGTACACGTGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAATGTTTTCTGATGGAAAGCTGAGAACATGCTTGATCCCTATTGCTGGTTTTCTTAATCATTCACTGTGCCCTCATATTACGCATTACGGCAAAGTAAGTGCGGGGATGAATTCATTGAAATTTTGTCTATCAAGGCCATGCAGATCTGGAGAAGAATGTTGCTTAAGCTATGGAAACTTTTCCAGCTCTCATCTAATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCCTATGATGTCATTCCATTAGACATGGATGGTTCTGATAATGATTCTATTGAGGATCAATCCAACTGGACGACTCACATGGTGCGTGATACTTACCTCTCCAACAATCATGACATGTTTCATTATGGCCTTCCCTCTCCATTACTGGACCACCTTCGGAGATCTCGAAGTCCTATGCAGCAAACTAAGACCTTCTTGCAAGGAAACTTGGAAAATGAGCTGGAAGTTCTTGAAGATCTCAAATATATCTTTGATGACATGATCGACAATATGGGCGAAATGGATTTTGTTGACAGAGAAAACTGTAGCTGGGATGAAAAATTGGCAATGAATTTTAAAATGCAACAAATTCGAATTGCCTCTTCTATTTCAACTTCTTGTCAAAATGGTCTCAACATGGTGAAGAATGAACTTCACAAGTGCATGGCCGAGGACATCCAAGGCTAA 1644 0.3905 MDTDEECTIVLELSKNDHFFDEKKKLLQSKGFTPKEHIYLRSSIKPGWINATVKVLLQIARIIQLNELELYFAEDGACTSEEFYSPRNELEALNSIVVLIDISLSSCTHLHTNILKELREIVIHLISDFGVKNSVKGVVERDYTCNQVQSLVEWGESNGVRTQLKISYVEGAGRGAIAREDLKVGDVALEIPLSIIISEELVYETYMHRVLKEVDGISSETILLLWSMKEKYNCDSKFKFYFDSLPEKFNTGLSFGIKAIMMLDGTLLLEEIMQAREHLRAQYDELFPALCDAFPDIFPLELYTWEKFLWACELWYSNSMKIMFSDGKLRTCLIPIAGFLNHSLCPHITHYGKVSAGMNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDMDGSDNDSIEDQSNWTTHMVRDTYLSNNHDMFHYGLPSPLLDHLRRSRSPMQQTKTFLQGNLENELEVLEDLKYIFDDMIDNMGEMDFVDRENCSWDEKLAMNFKMQQIRIASSISTSCQNGLNMVKNELHKCMAEDIQG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1265 547 CDD SET_LSMT 164 394 - -
Lal19g1265 547 PANTHER BNAA07G01600D PROTEIN 3 543 - -
Lal19g1265 547 Gene3D - 2 121 IPR036464 -
Lal19g1265 547 Pfam SET domain 173 380 IPR001214 GO:0005515
Lal19g1265 547 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Lal19g1265 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 543 - -
Lal19g1265 547 SUPERFAMILY SET domain 147 401 IPR046341 -
Lal19g1265 547 Gene3D set domain protein methyltransferase, domain 1 144 394 - -
Lal19g1265 547 Pfam Rubisco LSMT substrate-binding 15 106 IPR015353 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal19g1265 SET 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1265 K19199 - gmx:100778605 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1265 19 15816764 15823820 Lal19g1265 19 15816764 15823820 ECH