Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1252 ATGCAAGTAACCTTCAAAGGTTGTTACACTGTGAAGCCAATTGAACCAACATGGTGTGGTCACTTACCTTTATCTGAATGGGATCAAATAGGGACCATAACTCACGTGCCCACCATCTACTTCTACCGTCCCTCACAAAACTCAACCAATGTTATTGCTACCACCTTGAAAGACTCACTGAGCAGGGTCCTAGTGCCGTTTTATCCACTTGCTGGTCGTTTGCAATGGATTGGGAACGGTCGTTTTGAGCTTGAGTGCAATGGCACAGGAGTGCACTTCATTGAAGCCGAATCCTCATCAAATCTTGATGATCTTGGTGACTTTTCACCTTCTCCAGAATACAATTACCTTGTTCCAAGTGTGGACTATACCCTCCCTATTCATGAGTTGCCTTTGCTTTTGGTTCAGCTCACAATGTTCAAGTGTGGTGGCTTCAGCATCAGCCTAACAGTTTCACATGCAGTTGCTGATGGACCAAGTGCCTTACACTTCATTTCTGAGTGGTCAAGGTTTTCAAGATCAGGTGACAGTATTTTGAAAACGGTGCCATTTCTTGATAGAAAAGTTTTACGTGCAGGGTTACCACCTTTGATATCACTAGCACCATGCCATGCCAATTCAGCTTTCAATCACCCTCCTCTGTTGCTAGGACAATCTGACAACATAGAAGAAAGGAAAAAGAAAACCACTGTGGCTATGTTAAAACTGAACAAACACCAAGTTGAAATGTTAAGGAAGAGAGCAAATGAGAGTTGGAATAGGCCTAAGAATGACCGAAGTTACACACGGTATGAGACAGTAACCGGTCACATATGGAGAAGTGCATCCAAGGCAAGAGGGCATGAAAAGGATCAACCAACAGCCCTAGGTGTTTGTGTTGACTCAAGGACTCGCATGCAACCTCCATTGCCAAAAGGGTACTTTGGAAATGCTACTTTGGATGTGATAGCTACTAGTCTTGCTGGTGATTTGATGTCAAGGCCATTAGGGTATGCATCAAGTAGAATCAAGGAAGCTATTGAGAAAGTAACTGATGAGTATGTGAGGTCAGGGATTGAGTTTTTGAAGAAGCAAGAGGATTTGACAAGGTTTCAAGATCTTCATGCAATAGGGAGTGACAATGGGCCGTTCTATGGAAACCCTAATCTTGGTGTAGTTAGTTGGTTAACTTTGCCAATATATGAACTTGATTTTGGGTGGGGGAAAGAGGTTTACATGGGTCCAGGGACACATGATTTTGATGGAGATTCTTTGATCCTTCCTGGTCCTGATCGAGATGGCTCTTTAGTTGTTGCTATATGTCTTCAAGTGATCCATATGGATGCTTTTAAGAAGCATTTTTATGAAGATATTGTTGAAGAATCATTGGAAGACTGA 1377 0.4256 MQVTFKGCYTVKPIEPTWCGHLPLSEWDQIGTITHVPTIYFYRPSQNSTNVIATTLKDSLSRVLVPFYPLAGRLQWIGNGRFELECNGTGVHFIEAESSSNLDDLGDFSPSPEYNYLVPSVDYTLPIHELPLLLVQLTMFKCGGFSISLTVSHAVADGPSALHFISEWSRFSRSGDSILKTVPFLDRKVLRAGLPPLISLAPCHANSAFNHPPLLLGQSDNIEERKKKTTVAMLKLNKHQVEMLRKRANESWNRPKNDRSYTRYETVTGHIWRSASKARGHEKDQPTALGVCVDSRTRMQPPLPKGYFGNATLDVIATSLAGDLMSRPLGYASSRIKEAIEKVTDEYVRSGIEFLKKQEDLTRFQDLHAIGSDNGPFYGNPNLGVVSWLTLPIYELDFGWGKEVYMGPGTHDFDGDSLILPGPDRDGSLVVAICLQVIHMDAFKKHFYEDIVEESLED 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1252 458 Gene3D - 218 450 IPR023213 -
Lal19g1252 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 451 - -
Lal19g1252 458 Pfam Transferase family 1 449 - -
Lal19g1252 458 Gene3D - 1 205 IPR023213 -
Lal19g1252 458 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1252 Lal-Chr19 15731692 15733068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1252 1 449 Monolignol Biosynthesis Gene Families AT5G48930 40.444 4.03e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1252 K13065 - gmx:100777007 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1252 19 15731692 15733068 Lal19g1252 19 15731692 15733068 ECH