Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1246 ATGAGGGTGTTTGCATTTGGTTGTGTGTTGTTGATTATTGTATCTACTCTTGTAGTAGTTGGGAAGGGTGAGGTTTACATTGTAACTGTTGAAGGTGAGCCTATCATAAGTTATGCAGGAGGTATTGATGGCTTTCAAGCTACGGCTGTCGAATCCGATGAAAGTATTGACACTATGAGTGAATTGGTCATATCTTACGGTAATCATCTTGAAAAGAAGCATGATATGCTTCTGGGGATGGTGTTCGAGCAAGGGACATATAGGAAACTTTATAGCTATCGACATCTTCTAAATGGGTTTGCTGTTCATATTTCCCCTGAACAGGCAGAAACTCTGAGACGTACTCCAGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACGCATACCCCACAGTTTTTGGGGCTTCCAACTGGGGTTTGGCCAACCGGAGGTGGCTTTGATCGGGCCGGAGAAGATATCGTGATTGGAATGATAGACTCAGGAATCTATCCTCACCACCCAAGCTTTGCAACTCATAACACTGAACCATATGGACCAGCTCCAAAGTACAGAGGAAAATGTGAAGTTGATCCAGATACTAAAAGAAATTACTGTAATGGGAAAATTGTTGGAGCACAACACTTCGCCCAGGCTGCAATAGCTGCGGGAGCATTTAACCCTTCAGTTGATTTTGCGTCTCCTCTAGATGGGGATGGGCATGGAAGTTCCTCTGTTTTTCTTGCATCTTTATCCGGCAGTCATACAGCCTCTATTGCAGCTGGAAATAACGGAATTCCTGTGAGGATGCGTGGCCATGAATTTGGGAAAGCGAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTCGGAGGGTTTGTTGCTGATGTAGTTGCAGCGATTGATCAGGTAGACAAGCAATATATTCACACTGGATTACTTACATTTGAGAGTCAACAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAATTGGACCTAATGGTCCTCCGGCTGCAACCAAAAGCACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCAGTGAAAGCTGGTGTATTTGTTGCACAAGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTAGTTTCATATAGTCCATGGATAGCATCTGTAGCTGCTGCAATAGATGATCGTAGATACAAAAATCATTTAATCCTGGGAAATGGAAAAATATTAGCTGGAATCGGGTTATCACCTTCTACACAATTGAATGAAACATACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCAGTTACGAGGTACAACCCCACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGCAATATTCTTCTCTGTGGATATTCTTTTAACTTTTTTGCCGGTACTGCGTCAATAAAGAAAGCCTCGGAAACAGCAAAGGCCCTCGGTGCTGTTGGATTTGTTCTTTGTGTCGAAAACACTTCCTCCGGAAAAATATTTGATCCTGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTCAGCAATTCAAAGGAACTTGTAGATTATTATAATATTACTACAGCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAGGGTACAGGTAAAATTGGTGACGGTTTGATGCCTATTCTCCATAAATCTGCACCACAGGTGGCGTTGTTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATACTGGCTCCTGGCTCATTAATTTGGGCTGCTTGGTGTCCAAATGGAACCGATGAGCCCAATTATGTTGACTCACCATCTGGGCAGACTCAGATAGGTGAGGGGTTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAACAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCTACAACTCTAGACCGAGCCGGGAATCCTCTTTTAGCACAGCTAACTTCTGAAACAGAAGCTATAAAGTTTGTAAAAGCTACTCCTTTTGATTATGGTAGTGGACATGTTGATCCAACAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGGATATGAGGATTACTTAGGCTTCTTATGCACAACACCGGGAATTGACATTCATGAGATAAGGAACTACACTCACACACCATGCAACAATACCATGGGAAAACCATCAAATTTAAACACCCCATCTATCACAATTTCCCATCTTGTGGGAACTCAAGTTGTCATCCGCACTGTCACTAACGTTGCCGAGGAAGAAACCTATGCAATCACAGCCAGAATGGATCCAGCTATCGCCATCGAAGTCAACCCCCCGGCCGTGACTGTCAAAGCAGGCGCGTCAAGTAAGTTTACAGTGACACTTACCGTTCGCTCCGTTACTGGATCCTATAGTTTTGGACAGGTTTTGATGAAAGGTAGCAGAGGGCACAAAGTGAGGGTCCCTGTTGTGGTGAATGGATACCCAAGATAG 2568 0.4412 MRVFAFGCVLLIIVSTLVVVGKGEVYIVTVEGEPIISYAGGIDGFQATAVESDESIDTMSELVISYGNHLEKKHDMLLGMVFEQGTYRKLYSYRHLLNGFAVHISPEQAETLRRTPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGMIDSGIYPHHPSFATHNTEPYGPAPKYRGKCEVDPDTKRNYCNGKIVGAQHFAQAAIAAGAFNPSVDFASPLDGDGHGSSSVFLASLSGSHTASIAAGNNGIPVRMRGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQVDKQYIHTGLLTFESQQAVYDGVDILSLSIGPNGPPAATKSTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGIGLSPSTQLNETYTLVAANDVLLDSSVTRYNPTDCQRPELLNKNLIKGNILLCGYSFNFFAGTASIKKASETAKALGAVGFVLCVENTSSGKIFDPVPVGLPGILITDVSNSKELVDYYNITTARDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVDSPSGQTQIGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQLTSETEAIKFVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYLGFLCTTPGIDIHEIRNYTHTPCNNTMGKPSNLNTPSITISHLVGTQVVIRTVTNVAEEETYAITARMDPAIAIEVNPPAVTVKAGASSKFTVTLTVRSVTGSYSFGQVLMKGSRGHKVRVPVVVNGYPR 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1246 855 ProSitePatterns Serine proteases, subtilase family, serine active site. 635 645 IPR023828 -
Lal19g1246 855 Pfam Peptidase inhibitor I9 25 128 IPR010259 -
Lal19g1246 855 CDD PA_subtilisin_like 405 543 - -
Lal19g1246 855 Gene3D - 729 853 - -
Lal19g1246 855 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Lal19g1246 855 PRINTS Subtilisin serine protease family (S8) signature 634 650 IPR015500 -
Lal19g1246 855 CDD Peptidases_S8_3 131 671 IPR034197 -
Lal19g1246 855 Gene3D - 398 563 - -
Lal19g1246 855 PANTHER CUCUMISIN-RELATED 16 854 - -
Lal19g1246 855 Pfam Fibronectin type-III domain 757 850 IPR041469 -
Lal19g1246 855 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 854 IPR045051 -
Lal19g1246 855 Gene3D Peptidase S8/S53 domain 157 725 IPR036852 GO:0004252|GO:0006508
Lal19g1246 855 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Lal19g1246 855 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 129 IPR037045 -
Lal19g1246 855 ProSiteProfiles Serine proteases, subtilase domain profile. 124 712 - -
Lal19g1246 855 SUPERFAMILY Protease propeptides/inhibitors 87 128 - -
Lal19g1246 855 SUPERFAMILY Subtilisin-like 130 716 IPR036852 GO:0004252|GO:0006508
Lal19g1246 855 Pfam Subtilase family 155 675 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1246 Lal-Chr19 15680011 15686328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1246 7 855 Subtilisin-like Serine Gene Family AT4G30020 75.323 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1246 - - gmx:100787619 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1246 19 15680011 15686328 Lal19g1246 19 15680011 15686328 ECH
Lal7g1103 7 17003820 17012213 Lal19g1246 19 15680011 15686328 LSH
Lal19g1246 19 15680011 15686328 Lal21g1235 21 15406542 15415240 PCT
Lal21g1235 21 15406542 15415240 Lal19g1246 19 15680011 15686328 PCT