Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal19g1246 | ATGAGGGTGTTTGCATTTGGTTGTGTGTTGTTGATTATTGTATCTACTCTTGTAGTAGTTGGGAAGGGTGAGGTTTACATTGTAACTGTTGAAGGTGAGCCTATCATAAGTTATGCAGGAGGTATTGATGGCTTTCAAGCTACGGCTGTCGAATCCGATGAAAGTATTGACACTATGAGTGAATTGGTCATATCTTACGGTAATCATCTTGAAAAGAAGCATGATATGCTTCTGGGGATGGTGTTCGAGCAAGGGACATATAGGAAACTTTATAGCTATCGACATCTTCTAAATGGGTTTGCTGTTCATATTTCCCCTGAACAGGCAGAAACTCTGAGACGTACTCCAGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACGCATACCCCACAGTTTTTGGGGCTTCCAACTGGGGTTTGGCCAACCGGAGGTGGCTTTGATCGGGCCGGAGAAGATATCGTGATTGGAATGATAGACTCAGGAATCTATCCTCACCACCCAAGCTTTGCAACTCATAACACTGAACCATATGGACCAGCTCCAAAGTACAGAGGAAAATGTGAAGTTGATCCAGATACTAAAAGAAATTACTGTAATGGGAAAATTGTTGGAGCACAACACTTCGCCCAGGCTGCAATAGCTGCGGGAGCATTTAACCCTTCAGTTGATTTTGCGTCTCCTCTAGATGGGGATGGGCATGGAAGTTCCTCTGTTTTTCTTGCATCTTTATCCGGCAGTCATACAGCCTCTATTGCAGCTGGAAATAACGGAATTCCTGTGAGGATGCGTGGCCATGAATTTGGGAAAGCGAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTCGGAGGGTTTGTTGCTGATGTAGTTGCAGCGATTGATCAGGTAGACAAGCAATATATTCACACTGGATTACTTACATTTGAGAGTCAACAGGCTGTATATGATGGAGTGGATATACTCAGCCTTTCAATTGGACCTAATGGTCCTCCGGCTGCAACCAAAAGCACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCAGTGAAAGCTGGTGTATTTGTTGCACAAGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTAGTTTCATATAGTCCATGGATAGCATCTGTAGCTGCTGCAATAGATGATCGTAGATACAAAAATCATTTAATCCTGGGAAATGGAAAAATATTAGCTGGAATCGGGTTATCACCTTCTACACAATTGAATGAAACATACACATTGGTTGCTGCAAATGATGTGCTGCTAGATTCTTCAGTTACGAGGTACAACCCCACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAAAGGGCAATATTCTTCTCTGTGGATATTCTTTTAACTTTTTTGCCGGTACTGCGTCAATAAAGAAAGCCTCGGAAACAGCAAAGGCCCTCGGTGCTGTTGGATTTGTTCTTTGTGTCGAAAACACTTCCTCCGGAAAAATATTTGATCCTGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTCAGCAATTCAAAGGAACTTGTAGATTATTATAATATTACTACAGCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAGGGTACAGGTAAAATTGGTGACGGTTTGATGCCTATTCTCCATAAATCTGCACCACAGGTGGCGTTGTTCTCTGCTCGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATACTGGCTCCTGGCTCATTAATTTGGGCTGCTTGGTGTCCAAATGGAACCGATGAGCCCAATTATGTTGACTCACCATCTGGGCAGACTCAGATAGGTGAGGGGTTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAACAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCTACAACTCTAGACCGAGCCGGGAATCCTCTTTTAGCACAGCTAACTTCTGAAACAGAAGCTATAAAGTTTGTAAAAGCTACTCCTTTTGATTATGGTAGTGGACATGTTGATCCAACAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGGATATGAGGATTACTTAGGCTTCTTATGCACAACACCGGGAATTGACATTCATGAGATAAGGAACTACACTCACACACCATGCAACAATACCATGGGAAAACCATCAAATTTAAACACCCCATCTATCACAATTTCCCATCTTGTGGGAACTCAAGTTGTCATCCGCACTGTCACTAACGTTGCCGAGGAAGAAACCTATGCAATCACAGCCAGAATGGATCCAGCTATCGCCATCGAAGTCAACCCCCCGGCCGTGACTGTCAAAGCAGGCGCGTCAAGTAAGTTTACAGTGACACTTACCGTTCGCTCCGTTACTGGATCCTATAGTTTTGGACAGGTTTTGATGAAAGGTAGCAGAGGGCACAAAGTGAGGGTCCCTGTTGTGGTGAATGGATACCCAAGATAG | 2568 | 0.4412 | MRVFAFGCVLLIIVSTLVVVGKGEVYIVTVEGEPIISYAGGIDGFQATAVESDESIDTMSELVISYGNHLEKKHDMLLGMVFEQGTYRKLYSYRHLLNGFAVHISPEQAETLRRTPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGMIDSGIYPHHPSFATHNTEPYGPAPKYRGKCEVDPDTKRNYCNGKIVGAQHFAQAAIAAGAFNPSVDFASPLDGDGHGSSSVFLASLSGSHTASIAAGNNGIPVRMRGHEFGKASGMAPRARIAVYKALYRLFGGFVADVVAAIDQVDKQYIHTGLLTFESQQAVYDGVDILSLSIGPNGPPAATKSTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGIGLSPSTQLNETYTLVAANDVLLDSSVTRYNPTDCQRPELLNKNLIKGNILLCGYSFNFFAGTASIKKASETAKALGAVGFVLCVENTSSGKIFDPVPVGLPGILITDVSNSKELVDYYNITTARDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVDSPSGQTQIGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQLTSETEAIKFVKATPFDYGSGHVDPTAALDPGLIFDAGYEDYLGFLCTTPGIDIHEIRNYTHTPCNNTMGKPSNLNTPSITISHLVGTQVVIRTVTNVAEEETYAITARMDPAIAIEVNPPAVTVKAGASSKFTVTLTVRSVTGSYSFGQVLMKGSRGHKVRVPVVVNGYPR | 855 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal19g1246 | 855 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 635 | 645 | IPR023828 | - | |
| Lal19g1246 | 855 | Pfam | Peptidase inhibitor I9 | 25 | 128 | IPR010259 | - | |
| Lal19g1246 | 855 | CDD | PA_subtilisin_like | 405 | 543 | - | - | |
| Lal19g1246 | 855 | Gene3D | - | 729 | 853 | - | - | |
| Lal19g1246 | 855 | PRINTS | Subtilisin serine protease family (S8) signature | 155 | 174 | IPR015500 | - | |
| Lal19g1246 | 855 | PRINTS | Subtilisin serine protease family (S8) signature | 634 | 650 | IPR015500 | - | |
| Lal19g1246 | 855 | CDD | Peptidases_S8_3 | 131 | 671 | IPR034197 | - | |
| Lal19g1246 | 855 | Gene3D | - | 398 | 563 | - | - | |
| Lal19g1246 | 855 | PANTHER | CUCUMISIN-RELATED | 16 | 854 | - | - | |
| Lal19g1246 | 855 | Pfam | Fibronectin type-III domain | 757 | 850 | IPR041469 | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal19g1246 | - | - | gmx:100787619 | 1437.55 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal19g1246 | 19 | 15680011 | 15686328 | Lal19g1246 | 19 | 15680011 | 15686328 | ECH | |
| Lal7g1103 | 7 | 17003820 | 17012213 | Lal19g1246 | 19 | 15680011 | 15686328 | LSH | |
| Lal19g1246 | 19 | 15680011 | 15686328 | Lal21g1235 | 21 | 15406542 | 15415240 | PCT | |
| Lal21g1235 | 21 | 15406542 | 15415240 | Lal19g1246 | 19 | 15680011 | 15686328 | PCT |
Showing 1 to 4 of 4 entries