Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1240 ATGTGTGGAGGAGGGGGAAGAATATATGGGTTAGATTTGGAATTTCACAAACCATGTTCATTCTCTGTGTGTTCTTCTTCACCATCCTCAACTATTTCAGAATCAAGCAATTCAGTTATAACAATCTCAACTAAAAAACCCAGAACCCCGAGAAAGAGAATAAACCAAACCTACAATGAAGCCGCAGCACTTCTTTCAACTGCATACCCAAACCTTTTCTCTTTCAAAACCCTCAAAACGGCACCGTCAAATATATTTTTCAATGAAAATCTTTCATCGGAAGTTCTATTACCTTTCAGGGTTTTAGACTCATCTTCTTCAGTTTTACTCGATCAATGTAAGCCTAGTTTCTCAGTGAAGCCTAAAGTGGTGATGTTGCAAGAGAAATTATGTCAGAGCCCAGGGGAGATAAATTCGGCTTCGGCGATGATCAATTCGCTTGAACTGGACGATGATTGTGGTGAAGATTTCGATGCGGAATCGATTCTCGATGAGGAAATTGGAGAGGGGATTGATAGTATTATGGGGAGTGTGACGGAGAAGGAGAGTGACGGCGCCGTTTCGTGTCAGATTATTCCGGCGATTGATTCTGGCGGGAAACTGGATTGTAGGTTAGGGTTAAAAAGAGCTCTCCGCCACGTCGATGACGGTAGAGAGTGGTGGAATTTGCCATCGGTTGATATACTTAAAATTTCGCCTGAGATTGTCTACAAGTCGCAACCGCCTACAGCGGCGGAGAAGAAAAGGAAGAGGAAGAAGGTGGAGGTGAAGAAACCGGAAGCGGTGGCAGTGAAGGGAAATCCTACGGTGAAATCGGATACGGGTTTGATGTTGAAATTGAATTACAACGACGTGAAGAATGCTTGGTCTGATAAGGGTTCGCCGTTCGCCGATGATAGCTCCGTTTCCGTCGCATCGGGAAATGACGTCACAGTGCGGTTGTCTGAAATTGATTTGTGGTGGGACAATGGAAGAGTGAGAGAAGCTAGCGTGTTGCGCTACAAACAAAAGCGTCATATGCGCCTCTTCTCCAACAAGATCAGGTACCAAGGTAGAAAAGTCAATGCTGATCAACGGCCCATAATAAAGGTACAACCCAGTTGA 1104 0.4457 MCGGGGRIYGLDLEFHKPCSFSVCSSSPSSTISESSNSVITISTKKPRTPRKRINQTYNEAAALLSTAYPNLFSFKTLKTAPSNIFFNENLSSEVLLPFRVLDSSSSVLLDQCKPSFSVKPKVVMLQEKLCQSPGEINSASAMINSLELDDDCGEDFDAESILDEEIGEGIDSIMGSVTEKESDGAVSCQIIPAIDSGGKLDCRLGLKRALRHVDDGREWWNLPSVDILKISPEIVYKSQPPTAAEKKRKRKKVEVKKPEAVAVKGNPTVKSDTGLMLKLNYNDVKNAWSDKGSPFADDSSVSVASGNDVTVRLSEIDLWWDNGRVREASVLRYKQKRHMRLFSNKIRYQGRKVNADQRPIIKVQPS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1240 367 Pfam CCT motif 327 363 IPR010402 GO:0005515
Lal19g1240 367 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 363 - -
Lal19g1240 367 PANTHER OS02G0148000 PROTEIN 3 363 - -
Lal19g1240 367 ProSiteProfiles CCT domain profile. 327 367 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1240 Lal-Chr19 15654874 15658765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1240 274 363 C2C2-CO-like Transcription Factor Family AT1G73870 39.252 1.01e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal19g1240 CCT 6.1e-11 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1240 - - aprc:113845796 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1240 19 15654874 15658765 Lal19g1240 19 15654874 15658765 ECH
Lal14g1691 14 17096205 17101916 Lal19g1240 19 15654874 15658765 LSH
Lal7g1098 7 16976543 16980270 Lal19g1240 19 15654874 15658765 LSH