Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1231 ATGTTATCTGTGTTGCTGGCAGACACCAGAAACATTGTCAACAAAAAGATTTGCATTGCATTTACTTGGAGGATTCTAGGAAGCTTCACTTGTAGCAATGAATGTTTTTTTCCAACAAGCATTCACTTCAGTTGTAATAAATATTGTGCTGACATAGTGAAAATTGTTGTCAACTTTTATCTTACTTACCCTGCCTTTTTCTCCTTGTCATTGCTACCTTACCATCATTATTCTGCCTCAGGTAGTAGCAGTCAAATTCATGGTAGTTTGAGCAATACCAGATTATCACTGAATGGCAATTCTAATTCACTTGGGTTTGGCAGCAACTCCGGCCGAATCACCCGCTTCTTTGGGCCAAGTAGCAGTAATAACAGAAGCACATCTCTTTGGGGCTCTGAGAATAACCAAGTCTCTCCAACAATAGAGGAAAAGGAGTTCCCTAATGGCCAGATATTGGATATTGCAAACTTGACAGTATTGAATTCTCATAGCATTCAAAGATTTGAGGAATGGCAGACAGAAGTGAATTTCTTAGGCAGGCTTTCTCATCCCAACCTTGTAAAGTTGTTGGGATTAGGGAGAGAGGATAGTAAACTATTCCTGGTGTATGAGTTTATGAATCGCGGTAGCTTAGATAACCACATATATGGAAGAGGTGCAGGTGTCGAACCACTTTCTTGGGACACAAGGCTAAAAATTATGATTGGAGCAGCAAAGGGGTTGGCTTTTCTTCACACCTTAGAGAAGAGAATTATATACAGAGATTTGAAGCCCTCCAATATACTTCTTGACAAGCTGATTTTGGCTTTAGCCAGATCTATTCCATATCCTGATCAGTCTCATATAACAACAAGGGTTATGGGAACAATTGGCTATGCTGCTCCTGAGTACCTTATATCAGGTAATTTGTATGTGAAAAGTGATGTGTATGCATTTGGGATTGTTTTATTAGAGATGTTGACTGGCTTGCGAATACGTGACATAATAATGCGCCTCTCTCAGCCACACTCCTCCTTACAAAATTGGCTTAAATCAAGTCTGCTAAATAGAGGGAAAATGAGAAGCAACATGGATGCAAGGTTGGAAGGCAAGTATCCACCGAAATTAGCTTTAGAAGTTGCTCAAATTTCTCTCAAATGCATACAAACAAATGTCAAAGTTAAGCCATCAATGGTAGAAGTTGTTGAAAGATTGGAAAAGATTGAAGCTGCAAATGAGAAACCAGCTGACAGCATGAGGCGAGGTACTCGTTCCCGGGTAGTCCAACAACATCGACGGCCAGATGACGGTTAA 1293 0.4022 MLSVLLADTRNIVNKKICIAFTWRILGSFTCSNECFFPTSIHFSCNKYCADIVKIVVNFYLTYPAFFSLSLLPYHHYSASGSSSQIHGSLSNTRLSLNGNSNSLGFGSNSGRITRFFGPSSSNNRSTSLWGSENNQVSPTIEEKEFPNGQILDIANLTVLNSHSIQRFEEWQTEVNFLGRLSHPNLVKLLGLGREDSKLFLVYEFMNRGSLDNHIYGRGAGVEPLSWDTRLKIMIGAAKGLAFLHTLEKRIIYRDLKPSNILLDKLILALARSIPYPDQSHITTRVMGTIGYAAPEYLISGNLYVKSDVYAFGIVLLEMLTGLRIRDIIMRLSQPHSSLQNWLKSSLLNRGKMRSNMDARLEGKYPPKLALEVAQISLKCIQTNVKVKPSMVEVVERLEKIEAANEKPADSMRRGTRSRVVQQHRRPDDG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1231 430 ProSiteProfiles Protein kinase domain profile. 111 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1231 430 SUPERFAMILY Protein kinase-like (PK-like) 164 404 IPR011009 -
Lal19g1231 430 SMART serkin_6 72 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1231 430 Gene3D Phosphorylase Kinase; domain 1 145 206 - -
Lal19g1231 430 PANTHER OS01G0588500 PROTEIN-RELATED 80 159 - -
Lal19g1231 430 PANTHER OS01G0588500 PROTEIN-RELATED 159 430 - -
Lal19g1231 430 MobiDBLite consensus disorder prediction 405 430 - -
Lal19g1231 430 Pfam Protein kinase domain 167 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1231 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Lal19g1231 430 Gene3D Transferase(Phosphotransferase) domain 1 207 424 - -
Lal19g1231 430 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 159 430 - -
Lal19g1231 430 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 80 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1231 Lal-Chr19 15587480 15589632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1231 148 402 Receptor kinase-like Gene Family AT4G02010 40.602 8.25e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal19g1231 Pkinase 1.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1231 - - gmx:100813304 417.157