Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1213 ATGGAGATGGAGAATGGTGTGAAAAAGGAGGAGGAGGATGATGAACAAGCATTGGAATGTGAAGAGGGGGAAGGAGATGAGGTTTCAAGCATAACAATGGAGAGGGTAGCTGCTGCTAAGAAATTTATTGAGAACCATTACAAGTCTGAGAAGAAGCTTTTCCATGAACGTAAACAAAGGCGCTCGGTGTTAGAAGAGAAGTTAGCATCTTCTCATGTTCCAGAAGAGGAACAAATGAATCTACTAAAGGATTTAGAGCGCAAGGAAACTGAATATATACGCTTAAAAAGACATAAAATATGTGTTGATGATTTTGATCTTCTAACCATGATTGGCAGAGGAGCTTTTGGAGAGGTAACACTATGTAGAGAGAAGAAATCAGGTAACATATATGCCATGAAAAAACTGAAGAAATCTGAAATGCTCCGCAGGGGACAGGTTGAGCATGTTAGAGCAGAAAGGAATTTACTTGCAGAAGTTGCTAGTGACTGCATTGTGAAACTCTATTACTCTTTTCAGGATATTGAACACTTATATCTGATCATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGGGAAGAAACTTTAACTGAAACTGTAGCTAGATTCTACATTGGCCAAAGCGTTTTGGCTATAGAGTCTATTCATAAACACAACTACATTCACCGAGATATAAAACCTGACAACCTTCTACTAGACCAAAATGGTCACATGAAGCTCTCTGATTTTGGCCTTTGCAAGCCACTTGATTATGCAACTTTGTCATCTATAAATGAAGATGAGTTCCTGGATGATGAGAACTTTAATGATACAATGGTTGTTAGAAATGGAAGGCATTGGGAAAGCCCCCAAGAACAACTTCAGCATTGGCAAATGAACAGGAGGAAGCTGGCATTTTCAACTGTTGGAACTCCAGATTACATTGCTCCTGAAGTATTGCTGAAAAGGGGATACGGCGTGGAGTGGTCTCTTGGAGCTATAATGTATGAGATGCTTGTTGGCTATCCCCCATTTTACGCCGATGATCCGCTAACAACATGCAGAAAGATCGTGTATTGGAAAAATCACTTAAATTTTCCGGAGGAGGCCAGGTTGACACCAGAAGCAAAGAATCTAATATGTAGATTGCTTTGTGATCCTGAGCATAGGCTTGGTACCAGAGGAGCAGAAGAAATCAAGGCTTGTAAAATTTGTTGTTATCTTTTAGGTCTGTTTGCGAGTTGGGTTTTGAAGGGAAAGCTTCAAAGCCAACTTACAAGTGTTGAAGTACAACAAAAATCAACTACAACTGCATCTGGTGCCTTCAGAAAGATGACCCCTCAAGATCTCAATTTTGTTGGCTATACATACAAAAATTTTGCTGCTGTCAAGGGGAAACATAGTTCTATTGCTAATAAATCTTGTTTTGCTACAGTGAAGGAGGGCATGTCACCAGAGCAGTCAAAAGTTGACTCTGCACAAATTTTCTTATGTAAAAAAGTAGGCAAACCTGGTTCAAGGTTAATTGAGTTGCATGCACATTGTGCTGAACTAGTGGAGTGTACATGTATAGAACACCTTGATGATTGGGTTATAGAGTAA 1593 0.3955 MEMENGVKKEEEDDEQALECEEGEGDEVSSITMERVAAAKKFIENHYKSEKKLFHERKQRRSVLEEKLASSHVPEEEQMNLLKDLERKETEYIRLKRHKICVDDFDLLTMIGRGAFGEVTLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASDCIVKLYYSFQDIEHLYLIMEYLPGGDIMTLLMREETLTETVARFYIGQSVLAIESIHKHNYIHRDIKPDNLLLDQNGHMKLSDFGLCKPLDYATLSSINEDEFLDDENFNDTMVVRNGRHWESPQEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKRGYGVEWSLGAIMYEMLVGYPPFYADDPLTTCRKIVYWKNHLNFPEEARLTPEAKNLICRLLCDPEHRLGTRGAEEIKACKICCYLLGLFASWVLKGKLQSQLTSVEVQQKSTTTASGAFRKMTPQDLNFVGYTYKNFAAVKGKHSSIANKSCFATVKEGMSPEQSKVDSAQIFLCKKVGKPGSRLIELHAHCAELVECTCIEHLDDWVIE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1213 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 477 - -
Lal19g1213 530 Gene3D Transferase(Phosphotransferase) domain 1 192 404 - -
Lal19g1213 530 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Lal19g1213 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lal19g1213 530 SMART serkin_6 105 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1213 530 Pfam Protein kinase domain 108 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1213 530 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 8 477 - -
Lal19g1213 530 ProSiteProfiles Protein kinase domain profile. 105 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1213 530 MobiDBLite consensus disorder prediction 1 31 - -
Lal19g1213 530 Gene3D Phosphorylase Kinase; domain 1 99 191 - -
Lal19g1213 530 SUPERFAMILY Protein kinase-like (PK-like) 87 398 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1213 Lal-Chr19 15499285 15503227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1213 3 474 AGC Kinase Gene Family AT2G19400 65.010 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lal19g1213 Pkinase 1.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1213 K08790 - gmx:100811359 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1213 19 15499285 15503227 Lal19g1213 19 15499285 15503227 ECH