Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1211 ATGAAGAAAGAAGGGTTGGGGCTTGGTCTCAAACTCTCTGTTCCTGTTTCTGATCAAGCTTCTTTTGCCAAGTTTCTAACTGAAAGTGGCACTTTTAAGGATGGGGATCTACTTGTTAACAGAGATGGTCTTCGAATTGTTTCTCAGAGTGAAGTTGAAGCTCCACCCCCAATCAAGCCAACAGATGAGCAGTTAAGTTTGGCAGACATTGACATAGTGAAAGTGGTTGGGAAGGGAAGTGGAGGGGTTGTGCAATTGGTGCAACACAAATGGACTAGCCAATTTTTTGCATTGAAGGTACTTGAACTTATGAACTACTTCGCTTTATCTGACATATTCACAACCTCAGTGATAATTCAAATGAACATTGAGGAGCATATGCGCAAGCAGATAGTAAAAGAGCTAAAAATTAATCAAGCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTTTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGATCCTTAGCAGATCTTCTGAAGAAAGTTAAAACAATTCCAGAGCCTTATCTTGCTGCCATCTTTAAGCAGAAAGACCCAGGGGATAGACTGTCGGCTCAGGAACTTATGAACTATCCTTTTATGAGCATGTATGAGGACTTGGATGTGGATCTTTCAGCTTACTTCTCCAATGCAGGATCTCCGCTTGCAACCTTATAA 705 0.4085 MKKEGLGLGLKLSVPVSDQASFAKFLTESGTFKDGDLLVNRDGLRIVSQSEVEAPPPIKPTDEQLSLADIDIVKVVGKGSGGVVQLVQHKWTSQFFALKVLELMNYFALSDIFTTSVIIQMNIEEHMRKQIVKELKINQAAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPYLAAIFKQKDPGDRLSAQELMNYPFMSMYEDLDVDLSAYFSNAGSPLATL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1211 234 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 192 - -
Lal19g1211 234 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 192 234 - -
Lal19g1211 234 Gene3D Phosphorylase Kinase; domain 1 44 167 - -
Lal19g1211 234 SMART serkin_6 70 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1211 234 SUPERFAMILY Protein kinase-like (PK-like) 55 192 IPR011009 -
Lal19g1211 234 ProSiteProfiles Protein kinase domain profile. 70 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1211 234 Pfam Protein kinase domain 73 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1211 234 PANTHER MAP KINASE KINASE 3 192 - -
Lal19g1211 234 PANTHER MAP KINASE KINASE 192 234 - -
Lal19g1211 234 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1211 Lal-Chr19 15479310 15486833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1211 1 192 MAP Kinase Kinase Gene Family AT4G29810 60.199 2.75e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lal19g1211 Pkinase 1.5e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1211 K20603 - gmx:547701 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1211 19 15479310 15486833 Lal19g1211 19 15479310 15486833 ECH
Lal19g1211 19 15479310 15486833 Lal17g1511 17 16487368 16494601 PCT
Lal17g1511 17 16487368 16494601 Lal19g1211 19 15479310 15486833 PCT