Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1206 ATGTCGGCATCAGTGAACATTATTGTAGGTTCTCATGTTTGGGTTGAGGATCCAGTCCATGCATGGGTTGATGGAGAAGTATCTAAAATCAATGGTGACGAAGTCCATGTTTGCACCACAGATGGGAAAACAGTTGTCACAAATATCTCAAAGGTTTTCCCCAAGGATAATGAAGCCCCTCCTGGAGGTGTCGATGACATGACAAAACTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCTAATAGATATGAACTCAATGAAATTTACACGTATACTGGAAACATCCTGATTGCAATAAACCCATTTCAAAGGTTGCCACATTTATATGATACTCACATGATGGAGCAGTACAAAGGAGCTGGATTTGGAGAGTTGAGTCCTCATGTTTTTGCAATTGCAGATGTTGCGTACAGGGCAATGATCAATGAGGGAAAAAGTAACTCAATCTTGGTTAGCGGTGAGAGTGGGGCTGGTAAGACAGAAACTACAAAAATGCTCATGCGATATCTTGCATATCTCGGGGGTCGTTCTGGAGTAGAAGGAAGGACAGTTGAACAACAAGTTCTAGAATCTAATCCGGTTCTTGAAGCATTTGGCAATGCCAAAACAATCCGAAATAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAGGGAAGGATTTCTGGGGCTGCTATAAGAACTTATTTGCTAGAGAGGTCTCGTGTTTGTCAAATTTCAGATCCCGAAAGAAACTACCATTGCTTTTACCTTCTTTGTTCTGCACCAGCTGAGGAAAGAGAGAAGTATAAGTTGGGAAGTCCTAGTTCCTTCCATTACTTAAATCAATCCAAGTGCTATCAGCTGGATGGAGTGGATGATGCACATGAGTATCATGCCACTCGAAGAGCCATGGATGTTGTTGGAATTAGCGAGGAAGAGCAGGAGGCAATTTTTAGGGTTGTTGCAGCAATTTTGCACCTTGGAAACATTGAATTTTCAAAAGGAGAGGAAATTGACTCCTCTGTCGTCAAAGATGAGAAGTCTAGATTCCATCTTAATGTGACTGCTGAACTTCTTAAGTGCAATGCTACAAGCTTAGAAGATGCGCTGATCAAGCGTGTGATGGTAACACCTGAGGAGGTTATTACAAGAACTCTTGATCCTGATGCAGCTCTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATTAACAATTCAATCGGGCAAGATCCAAATTCAAAATCTATCATTGGAGTTCTTGATATCTATGGTTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTCACAAATGAGAAGTTGCAACAACATTTTAACCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAAAAATCAATTGGAGTTACATAGAGTTTATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATATCTCATTATGCAGGGGAGGTTACATATTTGGCTGATCTGTTTCTTGACAAAAACAAGGATTATGTAGTCGCAGAACATCAAGATCTACTGACAGCCTCGAAATGCTCATTTGCAGCAAGTCTATTCCCTCCTTCTCCAGAAGAGTCTTCAAAATCATCCAAGTTCTCTTCAATTGGATCTCGCTTTAAGCTACAACTTCAGTCTTTGATGGAGACCCTAAATTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTTCTAAAGCCTGCTATTTTAGAAAATGTCAATATTATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGCTATCCTACAAGACGGACTTTTTATGAATTTCTTAACCGGTTTAGTGTCCTTGCACCTGAAGTTCTGGATGGAAACTCTGATGACAAGGTTGCATGCCAAATGATTCTGGAAAAAATGGGTATTAAAGGCTACCAGATAGGGGAGACAAAGGTTTTCCTAAGAGCTGGACAGATGGCTGATCTGGATGCAAGAAGGGCAGAGGTTCTTGGAAACGCAGCTAGGATCATTCAGAGGCATATATGTACCCATATGGCACGCAAAGAATTCATTCAATTGCGCCAAGCTGCAGTTCTTCTGCAATCTAATTTACGAGGATTATTGTCTCGAAAGCTCTATGAACAGTTGCGACGTGAAGCAGCAGCAGTGAAGATAGAGAAGAACTTCAAACGATACATTTCCATGAAGTCTTATGTAACAGAACGATCGTCTGCAATTATATTACAAACAGGCTTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAGGCAAACAAAGGCTGCAATTTGTATCCAGGCTCATTTGCGTCGGCAATTTGCATACTCATATTATAAAAGATTGCAAAAAGCTGCAATTGTTACTCAGTGTGGCTGGAGGAGAAGGGTTGCCAAGAGGGAACTTAGAAATCTTAAGATGGCTGCAAGAGAAACAGGGGCCCTTAAAGAAGCAAAAGACAAACTAGAAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGACAAGGCACAAGAAATTGCCAAGTTGCAGGACACTTTGCATACAATGCAAAAACAAGTAGAAGAAGCAAATGCCAGGGTCGTCAAAGAGCGTGAGGAGGCACAAAAAGCCATTGAAGAAGCACCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTGGAAAGATTAATTCTTTAACGGTCGAAGTCAATAGTTTGAAGGAATCATTGCTATTGGAAAGAGAGGCTCATGAAGAGGCCAGGAAAGCTCAGGCTGAGGCTGAAGCTAGAAATAAGGAGCTGCTTAAAAAAGTTGAAGATTCTGATCGCAGAGTGGAACAGCTACAGGAATTGGTTCAGAGATTGGAGGACAAAATTTCCAATTCGGAGTCAGAAAATCAAGTTCTTCGCCAGCAAGCATTGGCTGTATCACCAACTGGGAAAGCTATGCCTGCAAGACCAAGATCGGTGATTATTCAGAGTTTCCTTCACAATCTGCAGAGGATACCAGAAAATGGGAATACTCCAAATGGTGAAACGAAAATTGGATCAGTAACAGATATGACTCTTGCTGTATCAAATGTACGCGAGCCTGAATCTGAGGGAAAACCACAGAAGACTCTGAATGAGAAGCAGCAAGAAAACCAGGACTTGTTGATCAAGTGTATAACGCAAGATTTGGGATTTTCTGGGGGCAAACCTGTTGCTGCATGTGTCATATATAAATGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGAACAAGCGTCTTTGACCGAATTATTGAAACAATAGCTTCAGCTGTTGAGGCCCAGGATAACACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACTCCAACGCACTCTCAAAGCAACTGGAGCTGCTAGCTTAACACCACAAAGGCGGAGAACATCATCATCTTCTCTATTTGGAAGAATGTCTCAAGGGCTAAGGGGATCTCCCCAAAGTGCTGGATTGTCATTTATAAATGGTCGAGGCCTTAGTAGAATGGATGATTTACGTCAAGTGGAAGCAAAATATCCAGCACTGCTGTTTAAGCAACATCTTACTGCCTTCCTTGAAAAAATATACGGAATGATAAGAGACAGCCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGCTCCTAGGACCTCACGTCAAAGTTTAGTAAAAGGAAGGTCACAAGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAATCTTAAACAATTATCTGAAGATAATGAAAGCAAATTATGCGCCTCCATTCTTGGTCCGTAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTATTCAACAGTCTTCTGTTGCGTCGGGAGTGTTGTTCATTCAGCAATGGGGAGTACGTAAAGACAGGTTTGGCTGAATTAGAACAGTGGGGTGTGGAGGCTACAAACGATTATATTGGCTCAGCTTGGGAGGAACTGAAGCATATCAGGCAGGCTGTTGGGTTCCTGGTGATACATCAAAAACCCAAAAAGTCCCTGAATGAAATAACAAAGGAGCTATGCCCTGTGGGTGCCTCCTTCCTTCCATTAAATATTCATGAAATCATACTTAGCTTTGATTCCCTTCCTAAGTATAATATTATGGTGCTGCAGGTTCTCAGTATACAACAGTTATACAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACACAGTGTGTCTACAGATGTTATAGCAAGCATGAGAGCTATGATGTCTGAGGACTCCAATAATGCTGTCAGCACTTCTTTTCTATTAGATGATGACTCGAGCATTCCATTTTCTGTGGATGACATTTCCAAATCCATGCAAGAAGTAGAAGTAGCTGAGGTAGATCCTCCTCCGTTGATGCGCGAGAACTCAGGGTTTGGGTTCTTACTTGCACGCTCAGAGTGA 4707 0.4073 MSASVNIIVGSHVWVEDPVHAWVDGEVSKINGDEVHVCTTDGKTVVTNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLANRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTIRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCSAPAEEREKYKLGSPSSFHYLNQSKCYQLDGVDDAHEYHATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFSKGEEIDSSVVKDEKSRFHLNVTAELLKCNATSLEDALIKRVMVTPEEVITRTLDPDAALGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEKINWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQDLLTASKCSFAASLFPPSPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPAILENVNIMQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFSVLAPEVLDGNSDDKVACQMILEKMGIKGYQIGETKVFLRAGQMADLDARRAEVLGNAARIIQRHICTHMARKEFIQLRQAAVLLQSNLRGLLSRKLYEQLRREAAAVKIEKNFKRYISMKSYVTERSSAIILQTGLRAMKARDEFRFRRQTKAAICIQAHLRRQFAYSYYKRLQKAAIVTQCGWRRRVAKRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEDKAQEIAKLQDTLHTMQKQVEEANARVVKEREEAQKAIEEAPPVIKETPVIIQDTGKINSLTVEVNSLKESLLLEREAHEEARKAQAEAEARNKELLKKVEDSDRRVEQLQELVQRLEDKISNSESENQVLRQQALAVSPTGKAMPARPRSVIIQSFLHNLQRIPENGNTPNGETKIGSVTDMTLAVSNVREPESEGKPQKTLNEKQQENQDLLIKCITQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSVFDRIIETIASAVEAQDNTDVLAYWLSNTSTLLLLLQRTLKATGAASLTPQRRRTSSSSLFGRMSQGLRGSPQSAGLSFINGRGLSRMDDLRQVEAKYPALLFKQHLTAFLEKIYGMIRDSLKKEISPLLGLCIQAPRTSRQSLVKGRSQANAVAQQALIAHWQSIVKILNNYLKIMKANYAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWGVEATNDYIGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPVGASFLPLNIHEIILSFDSLPKYNIMVLQVLSIQQLYRISTMYWDDKYGTHSVSTDVIASMRAMMSEDSNNAVSTSFLLDDDSSIPFSVDDISKSMQEVEVAEVDPPPLMRENSGFGFLLARSE 1568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1206 1568 CDD MYSc_Myo11 76 720 IPR036018 -
Lal19g1206 1568 PANTHER MYOSIN 6 1447 - -
Lal19g1206 1568 PANTHER MYOSIN 1472 1564 - -
Lal19g1206 1568 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 Coils Coil 877 957 - -
Lal19g1206 1568 CDD MyosinXI_CBD 1122 1534 IPR037975 GO:0007015
Lal19g1206 1568 Pfam DIL domain 1358 1444 IPR002710 -
Lal19g1206 1568 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Lal19g1206 1568 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Lal19g1206 1568 ProSiteProfiles Dilute domain profile. 1171 1511 IPR002710 -
Lal19g1206 1568 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 Coils Coil 992 1051 - -
Lal19g1206 1568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Lal19g1206 1568 Gene3D - 439 623 - -
Lal19g1206 1568 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Lal19g1206 1568 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lal19g1206 1568 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 Gene3D - 252 310 - -
Lal19g1206 1568 SMART DIL_2 1357 1493 IPR002710 -
Lal19g1206 1568 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 Gene3D - 667 730 - -
Lal19g1206 1568 PANTHER MYOSIN-5 6 1447 - -
Lal19g1206 1568 PANTHER MYOSIN-5 1472 1564 - -
Lal19g1206 1568 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Lal19g1206 1568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 785 IPR027417 -
Lal19g1206 1568 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Lal19g1206 1568 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Lal19g1206 1568 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal19g1206 1568 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Lal19g1206 1568 Gene3D - 785 832 - -
Lal19g1206 1568 Gene3D - 833 882 - -
Lal19g1206 1568 Gene3D - 735 784 - -
Lal19g1206 1568 SMART iq_5 805 827 IPR000048 GO:0005515
Lal19g1206 1568 SMART iq_5 853 875 IPR000048 GO:0005515
Lal19g1206 1568 SMART iq_5 757 779 IPR000048 GO:0005515
Lal19g1206 1568 SMART iq_5 830 852 IPR000048 GO:0005515
Lal19g1206 1568 SMART iq_5 734 756 IPR000048 GO:0005515
Lal19g1206 1568 SMART iq_5 782 804 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1206 Lal-Chr19 15450394 15463673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1206 67 1568 Myosins gene family AT5G20490 79.561 0.0 2459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1206 K10357 - gmx:100777802 2707.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1206 19 15450394 15463673 Lal19g1206 19 15450394 15463673 ECH
Lal14g1663 14 16874737 16888542 Lal19g1206 19 15450394 15463673 LSH
Lal7g1064 7 16712854 16726585 Lal19g1206 19 15450394 15463673 LSH