Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1197 ATGAATACTTTTAGATTTGTGTCTGGTATTAGTTGCAGATGGTTGAATTATTTGAGACCAAATATTAAAAGGGGCAATATATCATTGGATGAAGAAGACCTTATCATCAGGCTTCACAATCTCTTGGGGAACAGGGTGACAATGTCACATGATTCACAAATTAAAGATATTCACCAACTTAAGATCAATGCAAAGAGTATGGAGAATCCAAAGCCCAAGCCAATTCCCAAGGTGTTAAGCCATACCCGCACTAACTCATATTTCAACACCGCCGCCGCCGCTGCCGCTGCCGCCGCCACCAACGCAGTGATAATGTATCTTCAGTTTTACATAAATGAGAATGGTGACAAAGTCTACACCACTAAGAAAGAGTCACCACTTGGGTTAGCTACACAGTCTGCACATCCAGCCAGGTTTTCCCCTGATGACAAATATTCAAGGCAGAGAGTTCTTCTGAAGAAGCGTTTTGGATTGTTACCAACCCAGCAACCACCTCAAAAGTATTGA 507 0.4221 MNTFRFVSGISCRWLNYLRPNIKRGNISLDEEDLIIRLHNLLGNRVTMSHDSQIKDIHQLKINAKSMENPKPKPIPKVLSHTRTNSYFNTAAAAAAAAATNAVIMYLQFYINENGDKVYTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPQKY 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1197 168 PANTHER RIBOSOME BIOGENESIS PROTEIN NOP10 105 168 IPR007264 GO:0001522|GO:0030515|GO:0042254
Lal19g1197 168 PANTHER NUCLEOLAR RNA-BINDING NOP10P-LIKE PROTEIN 105 168 - -
Lal19g1197 168 Gene3D H/ACA ribonucleoprotein complex, subunit Nop10 114 158 - -
Lal19g1197 168 SUPERFAMILY Nop10-like SnoRNP 107 162 IPR036756 GO:0001522|GO:0030515|GO:0042254
Lal19g1197 168 Pfam Nucleolar RNA-binding protein, Nop10p family 107 156 IPR007264 GO:0001522|GO:0030515|GO:0042254
Lal19g1197 168 SUPERFAMILY Homeodomain-like 10 46 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1197 Lal-Chr19 15408653 15412829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1197 8 48 MYB Transcription Factor Family AT5G35550 74.419 2.57e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1197 K11130 - egr:104433665 134.035