Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1192 ATGACCCCATCAACTTCCTTCTCCTTCCTTATCCTACTCCAACTCTCATTGTTATCATGTATATCATCAGTGTCAGGAACAACCAGAAAAACATACATAGTTCACATGAAACACTATCATAAGCCTTCCATTTACCCCACACACCATCACTGGTATTCTGCTACTCTCAAATCTGTTTCCACTTCTAACAACTCTTCTTCTTATTCATTGCTTTATGACTACACCACTGTTTTCAACGGCTTTGCTGTTTCTCTTAACCCTAAACAAGCCCAAACACTTGGTAGTTCTGATTCTATACTAGGCTTGTATGAAGACACTCTCCACACTCTTCACACCACTCGTACCCCTCAATTTCTTGGCCTTCAAAATCAAACCCATTCCACTTTCTTCATGGATGAGACCCAAGATTTGCGTGACGTCATTATTGGAGTATTGGACACAGGTGTATGCCCAGAATCTCAAAGCTTTGATGACTCACTAATGTCTGAAATCCCCACGCGCTGGCACGGCGAGTGTGAATCCTCCATAGATTTCAACCCTTCCTTTTGCAATAAGAAACTCATAGGAGCTCGAAGCTTCTCAAGGGGATACCTCACCGCTAATGCTGGCTCTTACGTTAGAAAACCTATTGATATTTCCTCACCTCGCGATCGAGATGGACACGGCACCCACACCGCCACCATCGCCGCAGGATCCGCCGTCCCCAACGCTACACTCCTCGGCTACGCCACCGGTACCGCGCGGGGCATGGCTCCACATGCTCGCGTCGCTGCTTACAAGGTCTGTTGGACCGACGGTTGTTATGCCTCTGACATACTCGCCGGAATAGACCAAGCGATCATTGACGGAGTTGATGTTCTTTCTATCTCCCTTGGCAGCGCCTCCGCTCTATACCACCACGACACCATCGCTATCGGAGCCTTCACGGCGATGGAGAAAGGAATCTTCGTTTCTTGCTCCGCTGGGAATAGCGGACCGAGAAGAGGCTCCGTGGCCAATGTGGCACCGTGGATCATGACCGTCGGAGCTGGAACCCTAGATCGGGATTTTCCCGCGTACGCTTCTCTCGGAAACGGGAAACGTTTCGAAGGCGTTTCGCTTTACGGTGGAGAAGGAATGGGAGACAAACCGGTTGGTTTGATTTATTTTCGCGAGCGGTCTAACTCATCTAGTAGCATTTGCATGCCCGGTTCGCTTGAACCGGAAATCGTGCGTGGGAAGGTGGTGGTTTGTGATAGAGGACTTAATGGACGCGTGGAAAAGGGTTCGGTAGTGAGGGACGCCGGTGGAGTTGGGATGATACTGGCCAACACGGCAGCGAGTGGGGAGGAACTTGTGGCGGATAGTCACTTGATTCCGGCAGTGGCGGTGGGGAGAAGCGCGGGTGATGCGATCAAAGATTATGCAGCGTCTGATCGTAATCCAACGGCTATTATTAGTTTCGGTGGGACCGTGTTGGATGTGAAACCGTCGCCTGTGGTGGCGGCGTTCAGCTCTCGAGGGCCCAATGGAGAGACTAATCAGATACTCAAACCAGATGTTATTGGGCCTGGTGTTAACATCTTAGCTGCTTGGTCTAACACTATAGGCCCATCTGGTTTGTCTCAGGACACTCGCAAAACCCATTTCAATATAATGTCAGGTACGTCAATGTCATGTCCACACATAAGTGGGTTAGCTGCATTGTTGAAAGCAACTCATCCAGATTGGAGTCCAAGTGCAATCAAATCTGCACTAATGACAACAGCTTATACCCATGATAACACCTATTCCCCTCTTCGTGATGCAGCTGGAGAAGGTGAAGCTTTATCCACACCATGGGCTCATGGTGCTGGTCATGTTGACCCACAAAAAGCCCTTTCTCCTGGCCTTGTCTATGATGCCTCCACCCATGATTACATTGCATTCTTGTGTTCCTTAGACTATACCCTTGACCAAATACAAATCATTGTTAAAAGACCTGATTTAAATTGTTCCACCAAGTTTGATGACCCGGGTCAATTGAACTACCCTTCTTTCTCTGTGGTATTTGGAAGCAAGAGTGTTGTTGAGTACACACGCACATTGACAAATGTAGGGGCTGGAGGATCTGTTTACGATGTGAGTGTGAGTGTGCCATCGACTGTGGGGATAACGGTGAATCCCAACAGACTTGTATTTGGAGAGGTAGGGGATAGGCAAACGTACACAGTGACCTTTGTGTCTAAGAGGGGTGTTGATGATTCAGTTACTTCTGAATTTGGTAGTATTATGTGGAGCAATGAAGAACATCAAGTTAGAAGCCCAGTTGCTTTGACATGGACAGAATTATGA 2313 0.4816 MTPSTSFSFLILLQLSLLSCISSVSGTTRKTYIVHMKHYHKPSIYPTHHHWYSATLKSVSTSNNSSSYSLLYDYTTVFNGFAVSLNPKQAQTLGSSDSILGLYEDTLHTLHTTRTPQFLGLQNQTHSTFFMDETQDLRDVIIGVLDTGVCPESQSFDDSLMSEIPTRWHGECESSIDFNPSFCNKKLIGARSFSRGYLTANAGSYVRKPIDISSPRDRDGHGTHTATIAAGSAVPNATLLGYATGTARGMAPHARVAAYKVCWTDGCYASDILAGIDQAIIDGVDVLSISLGSASALYHHDTIAIGAFTAMEKGIFVSCSAGNSGPRRGSVANVAPWIMTVGAGTLDRDFPAYASLGNGKRFEGVSLYGGEGMGDKPVGLIYFRERSNSSSSICMPGSLEPEIVRGKVVVCDRGLNGRVEKGSVVRDAGGVGMILANTAASGEELVADSHLIPAVAVGRSAGDAIKDYAASDRNPTAIISFGGTVLDVKPSPVVAAFSSRGPNGETNQILKPDVIGPGVNILAAWSNTIGPSGLSQDTRKTHFNIMSGTSMSCPHISGLAALLKATHPDWSPSAIKSALMTTAYTHDNTYSPLRDAAGEGEALSTPWAHGAGHVDPQKALSPGLVYDASTHDYIAFLCSLDYTLDQIQIIVKRPDLNCSTKFDDPGQLNYPSFSVVFGSKSVVEYTRTLTNVGAGGSVYDVSVSVPSTVGITVNPNRLVFGEVGDRQTYTVTFVSKRGVDDSVTSEFGSIMWSNEEHQVRSPVALTWTEL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1192 770 Gene3D - 637 767 - -
Lal19g1192 770 Gene3D - 347 486 - -
Lal19g1192 770 Pfam PA domain 402 465 IPR003137 -
Lal19g1192 770 SUPERFAMILY Subtilisin-like 110 624 IPR036852 GO:0004252|GO:0006508
Lal19g1192 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 767 IPR045051 -
Lal19g1192 770 Pfam Subtilase family 139 588 IPR000209 GO:0006508|GO:0008236
Lal19g1192 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Lal19g1192 770 Pfam Peptidase inhibitor I9 31 108 IPR010259 -
Lal19g1192 770 CDD PA_subtilisin_like 353 479 - -
Lal19g1192 770 Gene3D Peptidase S8/S53 domain 139 633 IPR036852 GO:0004252|GO:0006508
Lal19g1192 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Lal19g1192 770 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lal19g1192 770 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lal19g1192 770 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Lal19g1192 770 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Lal19g1192 770 ProSiteProfiles Serine proteases, subtilase domain profile. 116 620 - -
Lal19g1192 770 CDD Peptidases_S8_3 116 584 IPR034197 -
Lal19g1192 770 PANTHER CUCUMISIN-RELATED 21 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1192 Lal-Chr19 15338151 15342703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1192 27 770 Subtilisin-like Serine Gene Family AT2G05920 66.040 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1192 - - gmx:100786523 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1192 19 15338151 15342703 Lal19g1192 19 15338151 15342703 ECH
Lal19g1192 19 15338151 15342703 Lal17g1493 17 16365806 16368478 PCT
Lal17g1493 17 16365806 16368478 Lal19g1192 19 15338151 15342703 PCT