Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1188 GTCCATTTCTACCGGACTTGTTACACCTCCGGCACGGCAATGGCCGCCGCTGTTCGCTTCCATTTCTATCTCTTCCTTCTTTCAACACTACTCTCTTTCTACCCTCTTCTTTCCATCAATCCAGAAAATGAAGCACTCCTCAAACTCAAACAATCATTCTCTACCTCTAACTCTCTCTCTTCTTGGGTCACAAATCAGAACCCATGTTCTTCAAAATGGGAAGGTGTTATCTGCGTCAATAATGCTATCACAAGCATTCACCTCGCAGATAAAGGTCTCTCTGGAAAGATTGACATCGAAGCTCTCATGCAGATTCCTTCCCTTCGTTCTCTTAGTTTCGTCAGAAACAATTTTTCAGGTCCAATACCAGAATTCAATAAACTTGGTGCTCTTAAGGCTATATACTTGACCAAAAACCAATTCTCTGGTCCTATTCCTTCAGAATTCTTCTCTCAGTTAGGCTCCTTGAAGAAAATATGGATATCAAATAACAAGTTCTCTGGAAATATACCTGATTCCTTAACAAAACTTAAGCTTTTAAACGAGTTGCACCTCGAAAACAACGAGTTTTCAGGGCCTATACCTGAGTTTAACAATAGTATTAAATCTTTGGACATGTCAAACAATAAATTGCAAGGTGAAATACCATCTAACATGGTGAAATTCGGTGCTGACTCTTTCTCCGGGAATGAAGGACTATGCGGGAAGCCATTGGATAAGGAATGTGACGGTTCTTTGGCAACGCCAAAACCTGAAAGTGGGATGAGTTGGGCGGTGAAGGTGATCATAATTCTTGTTATTTCAGCTGTTGTGGCTTTGGCTTTCATATTTATGAAGTCCAGGCGTAGAAATGATGATGATATTAGCGTGAGGAGCACTCAAAATAATCACAGTGGTCAAAACAACGTGGACAATGTGGTGCAAGTGCATGTTCCTAGCTCTAACCGTAGTAGGGGCTCGGAACATAGCACCAAAAAGGGTAGTGAATCGAAGAAGAGTTCTTCAAGGAATGGAATGGGTGATCTTATCATGTTGAATGATGAGAAGGGTACGTTTGGAATGCCAGATTTGATGAAGGCTGCGGCTGAGGTTTTGGGGAATGGTGGGTTGGGTTCGGCTTATAAAGCTGCCATGACGAATGGGTTGTCTGTGGTGGTGAAAAGGATGCGGGAGATGAATAAAGTTAGCAGAGACATTTTTGATGCAGAGATGAGACGCTTTGGTAGGCTTAGACATCCAAATATTTTGACTCCTTTGGCTTACCATTACCGCAGAGAGGAGAAGCTATTTGTCACAGATTATATGCCCAAGGGAAGCTTGTTATATGTTTTGCACGGTGATAGAGGAATAAGTCATGCTGAACTGAACTGGCCTACCCGTTTGAATATTGTGAAGGGAATTGCAAGAGGGTTGGGCTTCCTTTATTCTGAATTTTCATCAGAAGACTTGCCCCATGGAAACCTTAAGTCTAGCAATGTTTTACTAACAGATAATTATGAGCCACTCCTTAGTGATTTTGCCTTTCATGCACTCATCAACCCTAGCTATGCTATTCAGACAATGTTTGCCTACAAAACTCCTGATTATGTACACTACCAAACAATTTCACAAAAGACTGATATTTATTGCCTTGGAATTATCATTCTTGAAATTATCACAGGCAAATTTCCTTCTCAGTATCATAGTAATGGCAAGGGTGGAACTGATGTAGTGCAATGGGTCTTCACAGCAATTTGTGATAGAAGAGAGGAGGAATTGATTGATCCAGAGTTAAAAGGCAATACAAATTCACTCAACCAAATGTTGCAACTACTACAAGTTGGAGCTTCTTGCACAGAAAGCAACCCTGAGCAAAGACTTAACATGAAGGAGGCCATTAGGAGGATAGAGGAGGTACAAGTCTAA 1905 0.4126 VHFYRTCYTSGTAMAAAVRFHFYLFLLSTLLSFYPLLSINPENEALLKLKQSFSTSNSLSSWVTNQNPCSSKWEGVICVNNAITSIHLADKGLSGKIDIEALMQIPSLRSLSFVRNNFSGPIPEFNKLGALKAIYLTKNQFSGPIPSEFFSQLGSLKKIWISNNKFSGNIPDSLTKLKLLNELHLENNEFSGPIPEFNNSIKSLDMSNNKLQGEIPSNMVKFGADSFSGNEGLCGKPLDKECDGSLATPKPESGMSWAVKVIIILVISAVVALAFIFMKSRRRNDDDISVRSTQNNHSGQNNVDNVVQVHVPSSNRSRGSEHSTKKGSESKKSSSRNGMGDLIMLNDEKGTFGMPDLMKAAAEVLGNGGLGSAYKAAMTNGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRHPNILTPLAYHYRREEKLFVTDYMPKGSLLYVLHGDRGISHAELNWPTRLNIVKGIARGLGFLYSEFSSEDLPHGNLKSSNVLLTDNYEPLLSDFAFHALINPSYAIQTMFAYKTPDYVHYQTISQKTDIYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVFTAICDRREEELIDPELKGNTNSLNQMLQLLQVGASCTESNPEQRLNMKEAIRRIEEVQV 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1188 634 MobiDBLite consensus disorder prediction 291 318 - -
Lal19g1188 634 PANTHER LRR RECEPTOR-LIKE KINASE 22 634 - -
Lal19g1188 634 ProSiteProfiles Protein kinase domain profile. 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1188 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 634 - -
Lal19g1188 634 Pfam Protein kinase domain 363 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1188 634 SUPERFAMILY L domain-like 41 221 - -
Lal19g1188 634 Gene3D Phosphorylase Kinase; domain 1 324 434 - -
Lal19g1188 634 SUPERFAMILY Protein kinase-like (PK-like) 363 629 IPR011009 -
Lal19g1188 634 Gene3D Transferase(Phosphotransferase) domain 1 435 634 - -
Lal19g1188 634 MobiDBLite consensus disorder prediction 286 340 - -
Lal19g1188 634 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Lal19g1188 634 Gene3D Ribonuclease Inhibitor 200 244 IPR032675 -
Lal19g1188 634 Gene3D Ribonuclease Inhibitor 39 199 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1188 Lal-Chr19 15308207 15310806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1188 22 634 Receptor kinase-like Gene Family AT3G42880 49.921 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal19g1188 Pkinase 8.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1188 - - gmx:100816925 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1188 19 15308207 15310806 Lal19g1188 19 15308207 15310806 ECH
Lal14g1640 14 16756360 16758706 Lal19g1188 19 15308207 15310806 LSH
Lal19g1188 19 15308207 15310806 Lal21g1183 21 14646302 14650564 PCT
Lal21g1183 21 14646302 14650564 Lal19g1188 19 15308207 15310806 PCT