Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1157 ATGGTGATTGTAAATCTTGGTAAGGAAAGAGTACAAAGAATGGGAATTGGGAATTATGAGTTGGGTAGAACTCTTGGCGAGGGCAATTTCGGAAAAGTCAAGTCTGCAAGAAACACTCTTTCTGGTAAACCTTTTGCTGTTAAAATCCTTGACAAGAACAAGATCATTAATCTCAATACCACTGACCAGATAAAGAGGGAAATAGCAACCTTAAAACTTCTCAGACATCCCAATGTTGTTAGGTTACACGAGGTGTTAGCTAGCAAAACAAAAATTTACATGGTCCTTGAGTACGTGACTGGAGGGGAGCTATTTTACAAAATTGCATCCAAGGGAAAACTTACCGAAGTTGAAGGTAGAAAGTTGTTCCAACAGTTGATTGATGGTGTGAGTTACTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTTATTGATGGTAAAGGGAATATAAAGATAAGCGATTTTGGCCTTAGTGCTTTGCCCCAACATCTTAGGGAAGATGGACTGTTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTCTTGCCAATAAGGGCTATGATGGTGCAACATCAGATGCATGGGCATGTGGTGTTATCTTATATGTTATCCTAACAGGATACTTACCTTTTGATGATAGAAACCTTGCAGTTCTCTATCAAAAGATTTGTAAAGGAGACGTTCAAATACCAAAATGGCTATCATGTGGTGCCCAAAATATGATAAAGAGGGTTCTTGATCCGAATCCTAAAACTAGGATAACCATGGCTCAGATAAAAGAAGACCTATGGTTCAAGGAGGATTATACTCCACCAAATCCCTATGAGGATGAAGATGAGGAAAATATAGATATTGACAATGAAGCATTATCCATCCATGAAATGCCACATGAAGCAGAAGAGAGGAGTCCAAGAGCATCAACACTTATCAATGCATTTCAGTTAATTGGGATGTCTTCATGCCTAGACCTTTCTAACTTTTTTGAGAAAGAGGATGTCTCTGAAAGGAAGATAAGATTTACATCAAACCTTTCAGCTAAAGATTTGATCGATAGGATTGAGGACATTGTGACAGAAATGGGATTTAGAGTCCACAATAAAAATGGCAAATTGAAAGTGATTCTAGAGAACAACCCACATTATAAAAGTCAACGCTGCCTCTCAGTGGCAACAGAGGTGTTTGAAATAAGCCCATCATTGTATGTAGTAGAATTAAGGAAGTCTTATGGAGATGCTTCAGTATATAGACAGTTATGTAAGAGGTTATCAAATGATTTAGGTGTTCCCCCAAGTCAAGCTCTAATAAGTTCAGGCTCAGAAGTGAATTAG 1356 0.385 MVIVNLGKERVQRMGIGNYELGRTLGEGNFGKVKSARNTLSGKPFAVKILDKNKIINLNTTDQIKREIATLKLLRHPNVVRLHEVLASKTKIYMVLEYVTGGELFYKIASKGKLTEVEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLIDGKGNIKISDFGLSALPQHLREDGLLHTTCGSPNYVAPEILANKGYDGATSDAWACGVILYVILTGYLPFDDRNLAVLYQKICKGDVQIPKWLSCGAQNMIKRVLDPNPKTRITMAQIKEDLWFKEDYTPPNPYEDEDEENIDIDNEALSIHEMPHEAEERSPRASTLINAFQLIGMSSCLDLSNFFEKEDVSERKIRFTSNLSAKDLIDRIEDIVTEMGFRVHNKNGKLKVILENNPHYKSQRCLSVATEVFEISPSLYVVELRKSYGDASVYRQLCKRLSNDLGVPPSQALISSGSEVN 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1157 451 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1157 451 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1157 451 Gene3D Transferase(Phosphotransferase) domain 1 99 302 - -
Lal19g1157 451 Gene3D Kinase associated domain 1, KA1 314 437 - -
Lal19g1157 451 CDD CIPK_C 320 432 - -
Lal19g1157 451 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Lal19g1157 451 PANTHER SERINE/THREONINE KINASE 12 445 - -
Lal19g1157 451 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lal19g1157 451 Pfam NAF domain 317 374 IPR004041 GO:0007165
Lal19g1157 451 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1157 451 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Lal19g1157 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lal19g1157 451 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 445 - -
Lal19g1157 451 SUPERFAMILY Protein kinase-like (PK-like) 16 289 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1157 Lal-Chr19 15089175 15094721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1157 82 445 CBL-interacting serine-threonine protein kinases AT3G17510 68.219 8.17e-172 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal19g1157 Pkinase 4.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1157 K07198 - gmx:100777468 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1157 19 15089175 15094721 Lal19g1157 19 15089175 15094721 ECH
Lal14g1610 14 16551489 16556892 Lal19g1157 19 15089175 15094721 LSH
Lal7g1009 7 16309823 16315146 Lal19g1157 19 15089175 15094721 LSH
Lal19g1157 19 15089175 15094721 Lal17g1454 17 15923629 15932121 PCT
Lal19g1157 19 15089175 15094721 Lal4g1455 4 18725801 18733040 PCT
Lal17g1454 17 15923629 15932121 Lal19g1157 19 15089175 15094721 PCT
Lal4g1455 4 18725801 18733040 Lal19g1157 19 15089175 15094721 PCT