Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1156 ATGGTATCTGATCTGAATTCAGGGTTGTCCAAGAAAACATCTGTTTTTGGGTTAAAAGTATGGGAGTTAATGGGGTTAATAGTTGGTATGTTCATCATAGTCATTCTTGTGGTGTTATCAATATGCCTTTCAAGAAAGAAATCCAAAAGAGTCAATGGCATGTTTCCCCTAAGCCAAATGTTATCCTTTACAGAAGAGATCAAAGAGATTAGAGTTGATCAAGGTTCATCACATAATCATCCCCAAAATGACGCTTTTGTGAGTCTGTATGACAAATTTAGTGACAGGGAGTCTGAAAAGGTTTTCATTCTAGCAAAAAATGGGGATAATAGCAGTCATTCAGGTTCATTTGTTCATGTTGAGAATGATGCTGCTGGCTCTCAATCAGGTGAAGAAAGTAGTGTGAAGACTCTTTATAGGTCCTCTTCGCATCCTATAACCGCACAATCCCCTTTGTCCGGTCTTCCTGAGTTCTCTCAGCTTGGCTGGGGGCACTGGTTTACGTTAAGGGACCTAGAAGTTGCAACAAACAGGTTTTCGAAAGACAATATTATCGGCGAAGGTGGATATGGAGTTGTTTATCGAGGTCAGCTAGTCAATGGCAGTCCTGTAGCTGTTAAGAAGCTCCTTAATAATCTAGGACAAGCTGAAAAAGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTACGGCATAAGAACTTGGTCAGACTATTGGGATATTGCGTCGAAGGCACTCACAGGTTGTTGATTTACGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCACGCGGCAGTATGGTTTTCTTACTTGGGATGCTCGGATTAAAATTCTCCTTGGAACAGCTAAAGCGCTGGCTTACTTGCATGAGGCAATTGAGCCTAAAATTGTACATCGAGACATAAAGTCGAGCAATATTCTTATTGATGACGACTTCAATGCCAAAATATCCGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAGAGTCATATCACAACTCAAGTAATGGGCACTTTTGGATACGTGGCTCCAGAATATGCCAATTCTGGCTTTCTCAACGAGAAGAGTGATGTTTATAGTTTTGGAGTATTGCTTGTTGAAGCAATTACTGGAAGAGACCCGGTGGATTATAGTCGACCAGCAGCTGAGGTAAATTTGGTTGATTGGTTGAAGATAATGGTAGGGAGTAGGCGTGCAGAAGAGGTGGTGGATACCAACATTGAGACCAGACCATCAACAAGTTCCCTTAAACGTGCCATTTTGACTGCTTTGAGGTGTGTTGATCCATATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGAATGCTTCAATCAGAGGAGTATCCAGTTCCCCGAAAGGATCGAAGACACCGAAAGAGTCAGGCACAAAGTATAGAGATGGAGGCCCAGAAGGAGACTTCAGATACATATAAGAGTGACAATCCAGAATCCAAGCTCAATGGCAGAAGGAAACAAGGGAAGTAG 1506 0.4216 MVSDLNSGLSKKTSVFGLKVWELMGLIVGMFIIVILVVLSICLSRKKSKRVNGMFPLSQMLSFTEEIKEIRVDQGSSHNHPQNDAFVSLYDKFSDRESEKVFILAKNGDNSSHSGSFVHVENDAAGSQSGEESSVKTLYRSSSHPITAQSPLSGLPEFSQLGWGHWFTLRDLEVATNRFSKDNIIGEGGYGVVYRGQLVNGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGTHRLLIYEYVNNGNLEQWLHGATRQYGFLTWDARIKILLGTAKALAYLHEAIEPKIVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTQVMGTFGYVAPEYANSGFLNEKSDVYSFGVLLVEAITGRDPVDYSRPAAEVNLVDWLKIMVGSRRAEEVVDTNIETRPSTSSLKRAILTALRCVDPYSEKRPKMSQVVRMLQSEEYPVPRKDRRHRKSQAQSIEMEAQKETSDTYKSDNPESKLNGRRKQGK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1156 501 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
Lal19g1156 501 MobiDBLite consensus disorder prediction 454 501 - -
Lal19g1156 501 MobiDBLite consensus disorder prediction 443 501 - -
Lal19g1156 501 PANTHER OS01G0323000 PROTEIN 2 501 - -
Lal19g1156 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Lal19g1156 501 SMART serkin_6 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1156 501 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Lal19g1156 501 SUPERFAMILY Protein kinase-like (PK-like) 163 463 IPR011009 -
Lal19g1156 501 Pfam Protein kinase domain 180 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1156 501 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Lal19g1156 501 Gene3D Phosphorylase Kinase; domain 1 158 254 - -
Lal19g1156 501 CDD STKc_IRAK 185 451 - -
Lal19g1156 501 ProSiteProfiles Protein kinase domain profile. 179 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1156 Lal-Chr19 15078970 15082595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1156 156 453 Trihelix Transcription Factor Family AT1G70460 50.495 1.95e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal19g1156 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1156 - - gmx:100793499 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1156 19 15078970 15082595 Lal19g1156 19 15078970 15082595 ECH
Lal14g1606 14 16515411 16524143 Lal19g1156 19 15078970 15082595 LSH
Lal7g1008 7 16300919 16306375 Lal19g1156 19 15078970 15082595 LSH
Lal19g1156 19 15078970 15082595 Lal17g1450 17 15899194 15903762 PCT
Lal17g1450 17 15899194 15903762 Lal19g1156 19 15078970 15082595 PCT