Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1154 ATGATAGTTATACACCTCCAGATAATGGACACTTCATGCTACCCAATCCTACTGTACAATACAGGGAACACTGGTTATCATGGTACACACGCTGCAATAACTGCTCCTCGGACTATAAATTTTCAACCCATTGCTGTCCCTTCCCTTTCAGTAGATGAATTGAAGTCCGTGACAGATAATTTTGGTTCAAAATATTTCATTGGTGAGGGTGCATATGGGAAAGTATATCGTGCCGTTTTGAAAAATGGGCGTGCTGTGGCAATTAAAAAGTTAGATTCCAGTATACAACCAGACCAAGAATTTCTTGCTCAGGTATCCACTGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTGTTAGTTATTGTGTCGATGGTCCTTTGCGTGCACTTGCTTATGAATATGCTCCTAAAGGATCCCTTCATGATATTATACATGGGCGCAAAGGTGTGAAGGGTGCACAGCCTGGTGCAGTTCTCTCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCGGCCGCAGGACTTGAATATCTACATGAGAAGGCCGAGATTCATATTATCCATCGTTACATCAGGTCTAGCAATATACTACTCTTCGATAACGATGTTGCGAAGATTTCTGATTTTGATCTGTCCAATCAAGCCCCTGATGCAGCAGCTCGTCTTCATTCTACCCGTGTTCTAGGAACCTTCGGTTATCATGCTCCAGAATATGCAATGACTGGACAGCTTACTTCAAAAAGTGATGTATACAGCTTTGGAGTTATACTGCTAGAACTATTAACCGGGCGTAAACCCGTTGATCATACACTTCCCCGAGGACAGCAAAGCCTTGTAACCTGGGCAACACCGAAGCTTAGTGAGGATAAGGTGAAGCTGTGTGTTGATGTTAGATTAAATGGAGACTACCCTTTAAAGGCAGCTGCAAAGATGGCTGCTGTTGCTGCATTGTGTGTGCAATATGAAGCTGAATTTCGACCGAATATGAGCATAGTAGTGAAAGCTCTACAGCCACTACTAAATACTCGTTCTGTTCATCCAAAGGAAGCACCAAACTTGTAA 1065 0.4272 MIVIHLQIMDTSCYPILLYNTGNTGYHGTHAAITAPRTINFQPIAVPSLSVDELKSVTDNFGSKYFIGEGAYGKVYRAVLKNGRAVAIKKLDSSIQPDQEFLAQVSTVSRLKHENVVELVSYCVDGPLRALAYEYAPKGSLHDIIHGRKGVKGAQPGAVLSWAQRVKIAVGAAAGLEYLHEKAEIHIIHRYIRSSNILLFDNDVAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKLCVDVRLNGDYPLKAAAKMAAVAALCVQYEAEFRPNMSIVVKALQPLLNTRSVHPKEAPNL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1154 354 Gene3D Phosphorylase Kinase; domain 1 29 135 - -
Lal19g1154 354 SUPERFAMILY Protein kinase-like (PK-like) 40 337 IPR011009 -
Lal19g1154 354 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 23 350 - -
Lal19g1154 354 Pfam Protein tyrosine and serine/threonine kinase 67 337 IPR001245 GO:0004672|GO:0006468
Lal19g1154 354 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Lal19g1154 354 Gene3D Transferase(Phosphotransferase) domain 1 137 351 - -
Lal19g1154 354 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 23 350 - -
Lal19g1154 354 PIRSF ILK 23 349 - -
Lal19g1154 354 ProSiteProfiles Protein kinase domain profile. 61 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1154 Lal-Chr19 15073420 15076867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1154 42 353 Receptor kinase-like Gene Family AT4G02010 48.160 5.76e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lal19g1154 PK_Tyr_Ser-Thr 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1154 K13436 - gmx:547596 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1154 19 15073420 15076867 Lal19g1154 19 15073420 15076867 ECH