Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1136 ATGAAGGAGAAAAGAGAGAAAGAAGAACCAAACCCCATGGCTAATTCAGTTGCAGCAACATTTTCTGATGAGATTCCAAACATGAGCATCAACAACAACAATTTCATTTTCCCTTTCTCATCTAACACAAGCAGCTTTGATATGATTCCACCATCATCATCATCATCGTGTAATCAAAAACCTTCTTCTTCTTCTTCATCCTTTGGTGTTGGTTTCATGGACTTGCTCGCTGTTCATGATTACAATCCTTTTTTATTCGATTGCTTCGCCACCACTACCACAACCACTACCACCCAACTTGAAAACTATCACCACCCTCTTCCATCTCCGGCCGACGGCTCTGAGGTGCTGAACACTCCGGCGTCTCCCAACTCGACTTCAATTTCGTCGTCTTCGAATGAAGCTGCCACCGCCGCTGCCGCCACAATCAGCAATATTAATGAACTTCTGAGTGGTAAAGCAGAGAATGAAGAATATGAAGCAGAGGATGAAGATGGTGATAGAAGCAGAGGAGATTATCATGATCAACAAGATAAGATTAAGAAACAGCTGAAACCAAAAAAGAAGAACCAAAAGAAGCAAAGAGAACCGAGATTTGCTTTCATGACAAAGAGTGAAGTGGATCAATTAGACGATGGTTATAGGTGGCGCAAATATGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCAAGGAGCTATTATCGTTGCACCACCGCGGGTTGCGGTGTAAAGAAGCGGGTGGAGCGCTCCTCGGAGGACCCTACCATAGTAGTCACAACCTATGAAGGACAACACACACATCCTTGTCCCGCCACGTCACGTGCTTCACTCGGTTTCATGCAATACGGTAATAGTGGTAATAATAGTAGTGTTCTTGGTTCTCACCACTTTGTTCTTCCACATCATCAACACCAGTTTCATCAAGCTTTATCATATGATCCCACCACCCCATCACCTTTGAACTCTACTAGTGAATTCGTTAATCCGTCGTCGTTTAATGCCTTCTTTCAAGACGAAGAGAATCATCATCAAGGTTTTGAACCTTCTAGAACAACGTTTCTAATGGACAATGGGCTTCTTCAAGATATTGTGCCAACGCAGATGAGGAAGGAGAAGAAGGAAGAAGATGAGTAG 1134 0.4339 MKEKREKEEPNPMANSVAATFSDEIPNMSINNNNFIFPFSSNTSSFDMIPPSSSSSCNQKPSSSSSSFGVGFMDLLAVHDYNPFLFDCFATTTTTTTTQLENYHHPLPSPADGSEVLNTPASPNSTSISSSSNEAATAAAATISNINELLSGKAENEEYEAEDEDGDRSRGDYHDQQDKIKKQLKPKKKNQKKQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDPTIVVTTYEGQHTHPCPATSRASLGFMQYGNSGNNSSVLGSHHFVLPHHQHQFHQALSYDPTTPSPLNSTSEFVNPSSFNAFFQDEENHHQGFEPSRTTFLMDNGLLQDIVPTQMRKEKKEEDE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1136 377 ProSiteProfiles WRKY domain profile. 205 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1136 377 SMART WRKY_cls 210 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1136 377 MobiDBLite consensus disorder prediction 115 133 - -
Lal19g1136 377 MobiDBLite consensus disorder prediction 166 182 - -
Lal19g1136 377 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 366 IPR044810 GO:0003700
Lal19g1136 377 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 70 366 - -
Lal19g1136 377 Gene3D WRKY domain 194 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g1136 377 Pfam WRKY DNA -binding domain 211 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1136 377 SUPERFAMILY WRKY DNA-binding domain 202 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g1136 377 MobiDBLite consensus disorder prediction 151 198 - -
Lal19g1136 377 MobiDBLite consensus disorder prediction 101 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1136 Lal-Chr19 14909332 14912457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1136 181 371 WRKY Transcription Factor Family AT5G49520 54.726 8.89e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal19g1136 WRKY 4.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1136 - - gmx:100808190 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1136 19 14909332 14912457 Lal19g1136 19 14909332 14912457 ECH
Lal14g1585 14 16401040 16403412 Lal19g1136 19 14909332 14912457 LSH
Lal7g0982 7 16104792 16106795 Lal19g1136 19 14909332 14912457 LSH