Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1128 ATGGCGAAGTCGAAGAATCACACAGCTCATAACCAATCCTACAAGGCCCACAAGAATGGCATCAAAAAGCCGAAGAGGCACCGTCACACTTCCACCAAAGGGATGGATCCCAAGTTCTTGAGGAACCAGAGGTATGCAAGGAAGCATAACAAGAAGAACGGTGAAATCACCACTGAGGAAGAGTAA 186 0.4731 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEITTEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1128 61 MobiDBLite consensus disorder prediction 1 32 - -
Lal19g1128 61 Gene3D - 1 61 - -
Lal19g1128 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lal19g1128 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Lal19g1128 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Lal19g1128 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1128 Lal-Chr19 14849362 14850342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1128 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 83.607 2.30e-32 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1128 K02905 - gmx:100499874 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1128 19 14849362 14850342 Lal19g1128 19 14849362 14850342 ECH
Lal14g1575 14 16327834 16328551 Lal19g1128 19 14849362 14850342 LSH