Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1114 ATGGGAAAAATGGGACAAGAACCAGAATCTTCAAAGACCCAGTTGGTATTAGAGATTTACTCCATTTCCACACGTTCTGTTGTTTGTGTTCATAGACTTATTTCTTCAAACCCTGCCAAGGCAACCTTCATTGATTGGTATTGCATTCTTGGGGTGGAAGAAAATGCAGGAGTGAATACCATTCGCAAGAGATACCATAAACTGGCATTGCAACTTCATCCAGATAAGAATAAACACCCCAAGGCTGAGATTGCTTTCAAGCTTGTTTCTGAGGCATATATTTGCCTATCTAATGCTGCAAAGAGAAAAACCTTTGACTTGGAGAGACACAAGAACTTCTGCATTGAGTGCAAAAGAATCCCCTATACATCACACAATATTGTCAACCCTGGCAATTCAAGTGGTTCAGGTTTCAAGGCATGGAATATTATCAGCAGATCAAGATCATGTAAACTTTGGAGAAATATTAAGGATATCAGAGATAGATTCAAGGAGGAGGCTAAGGTGATAGAGAAATGTTTACAAGCAAATTCAATGATGTTAAGGAAAGAAGAATCTCCACTTTTTAATCCAGTTGAGTATCTACAAAGAAGCAAGTCACTGCATAGATTTGAGAAAGAAACTCCAGTTTTCAATCCATCAGATTACTTGCACCAAGGCTACCCTCATCTGAGGAGCCATGTTTACAAGAATTCTGCCACATTTTGGTTCTTGCAGACAGAAACTATGCTGCACAATGATAAGGGAGGAGCCAAGAATGCCTCCCCCATATTTGAGGTCAAATCAAGGAGAATGTGTGCAAGCAAATTTGCTTATGTACATTCATAA 828 0.3913 MGKMGQEPESSKTQLVLEIYSISTRSVVCVHRLISSNPAKATFIDWYCILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYICLSNAAKRKTFDLERHKNFCIECKRIPYTSHNIVNPGNSSGSGFKAWNIISRSRSCKLWRNIKDIRDRFKEEAKVIEKCLQANSMMLRKEESPLFNPVEYLQRSKSLHRFEKETPVFNPSDYLHQGYPHLRSHVYKNSATFWFLQTETMLHNDKGGAKNASPIFEVKSRRMCASKFAYVHS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1114 275 Gene3D DnaJ domain 44 169 IPR036869 -
Lal19g1114 275 PANTHER BNAC03G44070D PROTEIN 8 267 - -
Lal19g1114 275 PRINTS DnaJ domain signature 47 65 IPR001623 -
Lal19g1114 275 PRINTS DnaJ domain signature 65 80 IPR001623 -
Lal19g1114 275 PRINTS DnaJ domain signature 81 101 IPR001623 -
Lal19g1114 275 Pfam DnaJ domain 45 106 IPR001623 -
Lal19g1114 275 SUPERFAMILY Chaperone J-domain 35 111 IPR036869 -
Lal19g1114 275 CDD DnaJ 45 98 IPR001623 -
Lal19g1114 275 SMART dnaj_3 44 101 IPR001623 -
Lal19g1114 275 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 267 - -
Lal19g1114 275 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1114 Lal-Chr19 14741229 14743367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1114 27 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.535 5.68e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1114 - - gmx:100801809 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1114 19 14741229 14743367 Lal19g1114 19 14741229 14743367 ECH
Lal14g1564 14 16263022 16264294 Lal19g1114 19 14741229 14743367 LSH