Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1107 ATGACCCTTAAGGGTGGCACAACCCAGGCTTGCGCCGCGTGCAAATACCAGAGAAGAAAGTGCACTTCTGAATGCCTTCTTGCTCCATTTTTCCCTGCAGACCAACCCAAAGTATTTCTCAACGTTCACAAACTTTTTGGAGTGAGTAACATTGTAAAGATATTAAAGATCCTTGAGCCTAGTCAGAAGAAAATAGCTATGGACTCTATCATTATACAATCAAATTACAGGGATAAGTACCCTGTGCATGGTTGTTGGGAAGAAATTTGCAGGCTACAACACCAAATATGGTTGGCAGAAGATGAACTTCAAACTATTTATCAACAATTAGAGATGTGTAGACAACAACAACAAGGTCTAACAATGCCTGATTATATGAATGTTGCATCACAATTGGAGTTCGGAATTGCGGCGCCGTGTACTAATGCTCTCACACTCTTCAATCATAGTCCACAGGGACAAACTTATAGTAACATAACGGCTGCGGCTGAGGCTGAGGCGGCGCCGCCTTTGCCTGTTTCGCAACAACATTCCTACTCCAACAGCAACAGTGTGGATTATCATAATTCCCCTTACTTGGAATCCTATGATGACACCAACATGTGGATTCAGCATCATCTTCATTATGCAAATAATAATATCAATTCCATAGCAATGCAATCTCAGACACTTGCAATCCAGCAAGAAACTATTGATGATTATGAAGAGATGTATCCACTTTTTGATGCAATTGATGATAGGCAATCATATATTTACTCCAAGGAGGCTTATGAGTTAAGTTCAGAAGAATCGCTGAAAGATACGAGGAAGTTCACCGAGCATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGTTTCAGCCTTACCAGTGTCAATTGA 882 0.4093 MTLKGGTTQACAACKYQRRKCTSECLLAPFFPADQPKVFLNVHKLFGVSNIVKILKILEPSQKKIAMDSIIIQSNYRDKYPVHGCWEEICRLQHQIWLAEDELQTIYQQLEMCRQQQQGLTMPDYMNVASQLEFGIAAPCTNALTLFNHSPQGQTYSNITAAAEAEAAPPLPVSQQHSYSNSNSVDYHNSPYLESYDDTNMWIQHHLHYANNNINSIAMQSQTLAIQQETIDDYEEMYPLFDAIDDRQSYIYSKEAYELSSEESLKDTRKFTEHVAENELKNAAACFSLTSVN 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1107 293 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lal19g1107 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 266 - -
Lal19g1107 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 266 - -
Lal19g1107 293 Pfam Lateral organ boundaries (LOB) domain 10 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1107 Lal-Chr19 14691005 14692071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1107 1 114 AS2 family AT3G47870 60.526 4.93e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal19g1107 LOB 1.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1555 14 16216725 16217734 Lal19g1107 19 14691005 14692071 LSH
Lal7g0951 7 15852695 15853890 Lal19g1107 19 14691005 14692071 LSH