Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1098 ATGGTTATCGCCGGCGAAGTTTTCAGGCAGAATTTGTCGGAATTGTTAGAGGAATCACCTTCTGGTGCCGGAGAGCTTCACGTTCTTGCTGTGGATGATAGCTTCGTAGATCGCAAGGTTATTGAACGTTTGCTCAAGGTTTCATCTTGCAAAGTAACAGTTGTAGAAAGTGGAACCAGAGCTCTTCAATATTTAGGGTTGGATGGAGACAAAAACTCATTTGGTTTTGATAGTGTGAAGGTTAATATGATAATGACCGATTATTCCATGCCTGGCATGACAGGATATGAACTACTCAAGAAAATCAAGGAGTCATCTGTTTTTCGGGAGATTCCGGTGGTGATCATGTCTTCGGAGAATATCATGACTCGAATTGATAGGTGCTTAGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCTGTCAAGTTGGCAGATGTAAGACGCTTAACAGATTTCATTACGAGAGGTGATGTGAAGGAAGAAGTTAAGACATCACAGAAAAGAAAGCTATCTGATGGTTGCATTCCATCTCTATCAACTACGTTCTCGTCAGTTTCTCAACCAAGAGAACCATCATTATCGGGACTTTCACCACTATCACCATCCTCATTGTCCTCCAAGAAGTCTAGATTGTGTTCAGAGATATAG 648 0.4198 MVIAGEVFRQNLSELLEESPSGAGELHVLAVDDSFVDRKVIERLLKVSSCKVTVVESGTRALQYLGLDGDKNSFGFDSVKVNMIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENIMTRIDRCLEEGAEEFLLKPVKLADVRRLTDFITRGDVKEEVKTSQKRKLSDGCIPSLSTTFSSVSQPREPSLSGLSPLSPSSLSSKKSRLCSEI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1098 215 SUPERFAMILY CheY-like 25 151 IPR011006 -
Lal19g1098 215 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Lal19g1098 215 SMART REC_2 26 150 IPR001789 GO:0000160
Lal19g1098 215 CDD REC_typeA_ARR 28 149 - -
Lal19g1098 215 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Lal19g1098 215 MobiDBLite consensus disorder prediction 181 215 - -
Lal19g1098 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 9 211 - -
Lal19g1098 215 Gene3D - 26 190 - -
Lal19g1098 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 211 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1098 Lal-Chr19 14635231 14638403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1098 5 177 Response Regulator Gene Family AT3G48100 66.477 5.48e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal19g1098 Response_reg 1.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1098 K14492 - gmx:100796843 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1098 19 14635231 14638403 Lal19g1098 19 14635231 14638403 ECH
Lal14g1542 14 16142565 16149456 Lal19g1098 19 14635231 14638403 LSH