Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1092 ATGTCGAATAAGAGGCGCCCAGAAGAGGAAAAACCGAAATATGATTCTTCTGAAGATAAGCGTAGAAAGGCTCCTACATTCTCCAGTGTGGTGCGGGAGGTGATGAAGTTACAATCAGTCAGGAATTTGGTGGAGCCAATTCTAGAGCCCTTGGTTCGCCGAGTGGTTAGGGAGGAAGTTGAATTGGCCCTAAGGAAGCATTTAACTAGCATGAAACAGGCCAGTGGAAAGGAGATGCATATTACTGAATCCAGAAGCTTGCAGCTGCAGTTTGAAAATAGCATTTCTTTTCCTGTCTTTACCGGAGCTCGAATAGAAGGAGAGGATGGTTCTAACTTGAGGATAGGTTTAGTTGATGCCCTAACAGGGAAGGTTGTTAGCTCAGGGCCTGAATCTTTAGCTAAGGTGGAAATTGTAGTCCTCGAGGGTGATTTTAAAGATGAAAGTGATAATTGGATGCCGGAAGAATTCAGGAGCAATGTTGTTAGAGAGAGGGAAGGGAAAAAAGCCCTCCTTACAGGAGATGTAGTTATATATCTAAAAGATGGGACTGGTATGGTGGGTGAAATTTCATTTACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGGCAACTTCGATGGTATTATAATAAGAGAAGCAAAGACGGAGTCATTTATTGTCAGGGATCATCGAGGAGAATTGTACAAGAAGCACCACCCTCCTAGTTTGTCTGACGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCATAAGCGTTTGAGTCGGGAAAAGATCCGTACTGTGAAAGATTTTCTCACACTTCTCAATCTGGATCCGGCAAAGTTACGCAGTATACTGGGCTCAGGTATGTCTACAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGAACTTGAATCGAGGAGGCACCTGTACCTCCCTCCTCATTCTCAACAGAAAACTGGCGTGGCTGAAGCTCAAAGCTCAGTTATTTCTGCATTTAAACAAGGGGAGAATGTTTCCTCTTTTGAAGACGAAGTCTCTCTTATGGATATCTCTTCAAACTTAACTAATGCACTTTACTCCCCAAGCTCACTAAAGACTGAGGTATCCAGTGGCAACAAGCTTTTCGTTCCTCAAAAGGCTGGAGTAGGATTCAATTATGCACAATCAAGTGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGCGGAATTAGTGGCTTCGATGACTATGTCTTGCCTAATTTTGACAGCATGGGGCTTGGATATGATCAGACTCTTAGTTTTCCCTACCAACTCACCAACTCTTTGGTCTGTGAAACAGATTCAACGGCCCCTGCTTTTATCGATGAAGATCATATGCAATTTTTTGATACTGACATTCACTTTCAGTGTCACATTCAAGCAGATTTACAGAGTGCTATTGATGGCTTCATGTTGGGACGCACAACGAATGCCACTGGTAAAGCTCAGAAGAGATGGAGAAAGATATTCAATGTCCTAAAATGGTTCATGGTTTGGAAAGGAGTCAAATGCAGGTAG 1572 0.4332 MSNKRRPEEEKPKYDSSEDKRRKAPTFSSVVREVMKLQSVRNLVEPILEPLVRRVVREEVELALRKHLTSMKQASGKEMHITESRSLQLQFENSISFPVFTGARIEGEDGSNLRIGLVDALTGKVVSSGPESLAKVEIVVLEGDFKDESDNWMPEEFRSNVVREREGKKALLTGDVVIYLKDGTGMVGEISFTDNSSWTRSRRFRLGARVVGNFDGIIIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIRTVKDFLTLLNLDPAKLRSILGSGMSTKMWEVTVEHARTCELESRRHLYLPPHSQQKTGVAEAQSSVISAFKQGENVSSFEDEVSLMDISSNLTNALYSPSSLKTEVSSGNKLFVPQKAGVGFNYAQSSASSPDIMSSIYSVGGISGFDDYVLPNFDSMGLGYDQTLSFPYQLTNSLVCETDSTAPAFIDEDHMQFFDTDIHFQCHIQADLQSAIDGFMLGRTTNATGKAQKRWRKIFNVLKWFMVWKGVKCR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1092 523 Pfam Calmodulin binding protein-like N-terminal domain 87 232 IPR046831 -
Lal19g1092 523 Pfam Calmodulin binding protein central domain 244 310 IPR046830 -
Lal19g1092 523 MobiDBLite consensus disorder prediction 1 25 - -
Lal19g1092 523 PANTHER CALMODULIN-BINDING PROTEIN 60 A 331 519 - -
Lal19g1092 523 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 331 - -
Lal19g1092 523 PANTHER OS02G0177800 PROTEIN 1 331 IPR012416 GO:0005516
Lal19g1092 523 PANTHER OS02G0177800 PROTEIN 331 519 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1092 Lal-Chr19 14581321 14586394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1092 1 331 Calmodulin-binding Proteins AT5G62570 62.162 1.79e-144 418
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1092 19 14581321 14586394 Lal19g1092 19 14581321 14586394 ECH