Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1083 ATGAAGGAAAACAGTGATGGGTTTGTGCGGGCAGATCAGATTGATTTGAAGAGCATAGATGAACAGCTAGAGAGGCATCTCAACAAGGTTTTGACAATGGATAAGAAAAAGCACATAGAAGAGGAAGATGGTAATCGTGTTCATATGCACAGTGGCAGTGCTAGTAATTCTCCTATTGCTGCTACTAAATTCAGAAGTCCCTTCAAGAAGCAGAGACAGGAGTGGGAAATTGATCCTTCTAAACTGATTATTAGGAGTGTTATAGCTCGTGGCACTTTTGGAACAGTATACCGTGGTATCTATGACACCCAAGATGTTGCTGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGAACTGAAGCTGAAGTTGCTTCTCTGAGGGCAGCGTTTATCCAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCTAATGTCACTAAGAAAAAGCTGTTTGAGGATATCTCTACAGACTATAGCATATCCATTACAAGGGCAACAATGGGGTCTGCAGAATTACAGATACAAACTGACAATGGTCTAATCGGCATGCCAAGCAACATTTGTTGTGTTGTTGTGGAATATCTTCCTGGAGGTACACTGAAAAATTTCCTAATAAAGAACAGGAAGAGGAAGTTAGCCTTTAAGGTTGTCATCCAGCTCGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGTCACGCACGGTTAAAATTGCTGATTTTGGGGTTGCTCGTGTTGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGTACTCTTGGTTACATGGCTCCAGAGGTTCTAAATGGCAACCCCTATAACAGGAAATGTGACGTGTACAGTTTTGGCATCTGTTTATGGGAAACATATTGTTGTGACATGCCATATCCTGACTTAAGTTTCACAGAAATTAGTTCAGCCGTTGTTCGCCAGAATCTGAGACCAGAAATACCAAGATGTTGTCCAAGTTCTCTAGCAAATGTAATGAAGAAATGCTGGGATGCTAGTCCTGATAAGCGGCCGGAGATGGATGAGGTAGTTTCCATGCTGGAGGCCATTGACACTTCCAAAGGTGGCGGTATGATCCCTCCAGATCAACAGGAAGGTTGTCTTTGCTTCCGCAAGCGTAGAGGGCCTTGA 1200 0.4292 MKENSDGFVRADQIDLKSIDEQLERHLNKVLTMDKKKHIEEEDGNRVHMHSGSASNSPIAATKFRSPFKKQRQEWEIDPSKLIIRSVIARGTFGTVYRGIYDTQDVAVKLLDWGEEGQRTEAEVASLRAAFIQEVAVWHKLDHPNVTKKKLFEDISTDYSISITRATMGSAELQIQTDNGLIGMPSNICCVVVEYLPGGTLKNFLIKNRKRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFTEISSAVVRQNLRPEIPRCCPSSLANVMKKCWDASPDKRPEMDEVVSMLEAIDTSKGGGMIPPDQQEGCLCFRKRRGP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1083 399 Gene3D Phosphorylase Kinase; domain 1 62 150 - -
Lal19g1083 399 MobiDBLite consensus disorder prediction 41 61 - -
Lal19g1083 399 PRINTS Tyrosine kinase catalytic domain signature 193 206 IPR001245 GO:0004672|GO:0006468
Lal19g1083 399 PRINTS Tyrosine kinase catalytic domain signature 231 249 IPR001245 GO:0004672|GO:0006468
Lal19g1083 399 PRINTS Tyrosine kinase catalytic domain signature 297 319 IPR001245 GO:0004672|GO:0006468
Lal19g1083 399 PRINTS Tyrosine kinase catalytic domain signature 341 363 IPR001245 GO:0004672|GO:0006468
Lal19g1083 399 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 393 - -
Lal19g1083 399 SUPERFAMILY Protein kinase-like (PK-like) 57 370 IPR011009 -
Lal19g1083 399 SMART serkin_6 82 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1083 399 Pfam Protein tyrosine and serine/threonine kinase 187 370 IPR001245 GO:0004672|GO:0006468
Lal19g1083 399 CDD STKc_MAP3K-like 88 370 - -
Lal19g1083 399 ProSiteProfiles Protein kinase domain profile. 82 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g1083 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Lal19g1083 399 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 393 - -
Lal19g1083 399 Gene3D Transferase(Phosphotransferase) domain 1 196 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1083 Lal-Chr19 14529292 14533589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1083 6 399 MAP Kinase Kinase Kinase AT3G22750 62.312 0.0 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal19g1083 PK_Tyr_Ser-Thr 5.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1083 - - gmx:100807921 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1083 19 14529292 14533589 Lal7g0926 7 15688255 15689157 ECH
Lal19g1083 19 14529292 14533589 Lal19g1083 19 14529292 14533589 ECH
Lal14g1525 14 16046701 16050885 Lal19g1083 19 14529292 14533589 LSH