Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1059 ATGGCATCATCCAGCTCTTACAATTCTCCCTGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCGCCTTACTTCCCACCAGAAGAGCCTCAAAAATTCGCTAATGTCCACAAAATCTTTGGTGCTAGCAATGTGACTAAGCTCCTCAACGAACTCCTTCCTCACCAGAGAGAGGATGCAGTGAATTCCCTTGCCTATGAAGCAGAGGCTCGTGTGAGGGACCCAGTTTATGGCTGCGTTGGTGCCATTTCTTTCCTCCAGAGACAAGTTCAGAGGCTCCAGAAGGAGCTTGATGCTGCAAATGCTGATTTGCTTCGCTATTCCTTCAGTGACATTCCTCCTGCAGCAATTTCTGTTCCTCCAGGGTTAGCTTCTCTTCAACAAATTCCACAAAGGGGGTTCGGTGCAAGAATTGGTAATGAAGGAAGTGGATTTTATCACCAAATTCCAAATACTGCTTATTCTTTTCCTTATTCTCTTCCTTGGAATGACAACTTTTCAGAGGACATAAGTGAGGGTGGAGAAGGAGGTAATTTGTGA 558 0.457 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFSDIPPAAISVPPGLASLQQIPQRGFGARIGNEGSGFYHQIPNTAYSFPYSLPWNDNFSEDISEGGEGGNL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1059 185 Coils Coil 89 109 - -
Lal19g1059 185 PANTHER ELONGATED PETIOLULE 1 1 184 - -
Lal19g1059 185 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lal19g1059 185 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lal19g1059 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1059 Lal-Chr19 14365065 14365622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1059 1 185 AS2 family AT5G63090 65.306 7.64e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal19g1059 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1059 - - gmx:100803667 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1059 19 14365065 14365622 Lal19g1059 19 14365065 14365622 ECH