Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1056 ATGGAATCGGTTGCGCAAAAGACAGCGCCAACTCATAACTCTTCCCACAATCACCCTCCTAATAAGGTAGCCATACCCCTTATTATCCAACCTTCCATTGATGCCATTCCTCCTCCTCAAGGAGTAACTGCATTGACAAGGGCCCAATCAAGCCACCCTTTAGACCCTTTATCGGCTGCCGAAATCACGGTGGCAGTTGCAACCGTGAGGGCAGCTGGTGCCACTCCAGAGCTCAGAGATAGTATGCGCTTTATCGAAGTAGTTTTGTTGGAACCAGATAAACATGTTGTTGCACTAGCAGATGCTTATTTATTTCCACCTTTCCAACCATCATTACTTACTAGAACTAAAGGAGGGCCTGTAATAATTCCAAGTAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTACAATAAGAGGACAAATGAGACAAGTATATGGCTTGTTCAATTATCAGAAGTACATGCGGTAACTCGAGGAGGTCATCACCGTGGAAAATTAATTTCATCACATGTTGTTCCTGAGGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAGTGTGAAGCTGTTGTTAAAGATTTTCCTCCATTTAAAGAGGCTATGAAGAAAAGGGGTATTGAGGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTTGGTAATTACAGTGAAGCTGATGCTCCATGCCGTAGACTTGCTAAACCACTTATATTTTGTCGAGCTGAGAGTGACTGCCCGATGGAAAATGGCTATGCACGCCCAGTTGAAGGCATCTATGTGCTTGTTGATATGCAAAACATGGCGGTGATTGAGTTTGAAGATCGAAAACTTGTTCCTCTCCCTCCAGTTGATCCCCTGAGGAACTATACTCCTGGTAAGACAAGAGGTGGAGTTGATAGAAGTGATGTAAAGCCCTTGCAAATTATTCAGCCCGAAGGTCCAAGTTTTCGTGTCAATGGACATTATATCGAATGGCAGAAGTGGAATTTTCGTATTGGATTCACACCCAGAGAAGGTCTGGTTATATATTCTGTTGCATATGTTGATGGTAGTCGAGGACGAAGGCCTTTAGCTCATAGATTGAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCAAATGAACCACATTACAGGAAGAATGCATTCGATGCCGGCGAAGATGGCCTGGGAAAAAATGCACACTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATCAAATATTTTGATGCTCACTTCACAAATTTCACCGGCGGAGTTGAGACAATTGAAAATTGTGTATATTTGCATGAAGAGGATCACGGAATTCTATGGAAGCATCAAGACTGGAAAACTGGCTTAGCAGAAGATGGGAGAATTGAAGCTGAAGTTAAGTTAACTGGAATTCTAAGTTTAGGAGCTTTGCTACCTGGACAGTTTAGAAAATATGGAACCATGATTGCACCAGGTCTATATGCTCCAGTTCATCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTAGATTCTAAACCAGGTGAAGCTTTAAATCAGGTTGTGGAGATCAATGTCAAAGTTGAGGAAACTGGGGAGAATAATGTTCACAACAATGCATTCTATGCTGAGGAGACTCTGCTCAGATCTGAATTGGAAGCAACGCGTGATTGTAATCCTTCGACTGCTCGACATTGGATTGTAAGGAACACAAGAACAGGAAATAGAACTGGTCAGTTGACAGGCTATAAGCTAGTACCTGGCTCAAATTGTTTGCCACTAGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTAACATCTTACTCTCGTGATGAAATGTTTCCCGGAGGAGAATTTCCTAATCAAAATCCACGCGTTGGCGAAGGACTAGCTACATGGGTCAAGCAGAACCGATATTTGGAAGAAAGCGATATAGTTCTTTGGTATGTATTTGGAATCACGCATGTCCCTCGCTTAGAAGATTGGCCTGTTATGCCAGTTGAACGCATTGGTTTTACGCTTGTGCCTCATGGATTCTTCAATTGTTCCCCTGCAATAGATGTTCCACCTAGTCCATGTGAATTGGATTCTAAACATAATGACATCAAAGATAATAATGGGCCTCCCAAGCAAATTCAGAATGGATTGGTGGCAAAACTTTAG 2169 0.4292 MESVAQKTAPTHNSSHNHPPNKVAIPLIIQPSIDAIPPPQGVTALTRAQSSHPLDPLSAAEITVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYLFPPFQPSLLTRTKGGPVIIPSKLPPRCARLVVYNKRTNETSIWLVQLSEVHAVTRGGHHRGKLISSHVVPEVQPPMDAVEYAECEAVVKDFPPFKEAMKKRGIEDMDLVMVDAWCVGNYSEADAPCRRLAKPLIFCRAESDCPMENGYARPVEGIYVLVDMQNMAVIEFEDRKLVPLPPVDPLRNYTPGKTRGGVDRSDVKPLQIIQPEGPSFRVNGHYIEWQKWNFRIGFTPREGLVIYSVAYVDGSRGRRPLAHRLSFVEMVVPYGDPNEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVYLHEEDHGILWKHQDWKTGLAEDGRIEAEVKLTGILSLGALLPGQFRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEINVKVEETGENNVHNNAFYAEETLLRSELEATRDCNPSTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTSYSRDEMFPGGEFPNQNPRVGEGLATWVKQNRYLEESDIVLWYVFGITHVPRLEDWPVMPVERIGFTLVPHGFFNCSPAIDVPPSPCELDSKHNDIKDNNGPPKQIQNGLVAKL 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1056 722 PANTHER COPPER AMINE OXIDASE 37 452 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 PANTHER COPPER AMINE OXIDASE 452 707 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 MobiDBLite consensus disorder prediction 1 20 - -
Lal19g1056 722 Pfam Copper amine oxidase, N2 domain 52 97 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 Pfam Copper amine oxidase, enzyme domain 450 688 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 Pfam Copper amine oxidase, enzyme domain 307 448 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 SUPERFAMILY Amine oxidase N-terminal region 49 177 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 SUPERFAMILY Amine oxidase catalytic domain 301 692 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 Gene3D - 39 180 - -
Lal19g1056 722 Gene3D Copper amine oxidase, catalytic domain 449 692 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 SUPERFAMILY Amine oxidase N-terminal region 177 295 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 Pfam Copper amine oxidase, N3 domain 178 281 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lal19g1056 722 PANTHER AMINE OXIDASE 37 452 - -
Lal19g1056 722 PANTHER AMINE OXIDASE 452 707 - -
Lal19g1056 722 MobiDBLite consensus disorder prediction 1 22 - -
Lal19g1056 722 Gene3D - 183 285 - -
Lal19g1056 722 Gene3D Copper amine oxidase, catalytic domain 297 448 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1056 Lal-Chr19 14331692 14337324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1056 K00276 - zju:107418311 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1056 19 14331692 14337324 Lal19g1056 19 14331692 14337324 ECH
Lal7g0910 7 15577935 15580989 Lal19g1056 19 14331692 14337324 LSH
Lal19g1056 19 14331692 14337324 Lal17g0895 17 6912331 6918941 PCT
Lal17g0895 17 6912331 6918941 Lal19g1056 19 14331692 14337324 PCT