Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1054 ATGACATTCCATTTTCATTATCAAAAACCTGTTTCGGAACCCTCCCCTTGGTTCCCACGTCCTATAAATACCCCGCAATCTCACTTCACAACCAGGGTTTTCAAACCGCACCACCCTCTTCCTCTATCCCTAATTCTTCGTCTTATAACTGAAACTACTTCACGTCTAAACCTTCAGAACTACTCTGTCATGGAACACATACCCACACCTACTACTATTAAGTTCCTCTATAGCTACGGCGGAAAAATCCTCCCACGCGCCACCGACGGCGAACTCCGTTACTCCGGCGGCCATACCAGAGTCCTCACTATCGATCCTTCTATGTCTTTCTCAGAGTTGATGGTAAAGCTTAATGACTTGTGTGGTTCCTCCTCTGTAACCTTGAAGTGTCTGTTACCTAACGGAAACTTGGAGACTTTGATTTCGATCACCAGCGACGAAGATTTGGCCAATATAGTTGAGGAATATGATCGAGTTTCGTTGCTGTTAACTCATCCGTTGAAAATCAGAGCCATTCTTTCGCCGTTGAAGAAACTATCTTCTTCTCTGTCTTCTTCATCCTCTGCCACTCACTCTTCCTCCGGATCGCCCCACTCCTCTGCCGAGTCACCGCCGTATGCGGTGGCGCGTCAGTTTTTTAAGCCGGAATTGCCGCCGGTTTTGTATCCAGTTGGTGGCGGTTACGGGTCGGTGAAAGATTCTTGGTACCCGGGGCAATTTGGAAGCCCTAGATTCCTCTATCGTGGACCTCACTCTTATAATTACTGCCACTGA 774 0.4755 MTFHFHYQKPVSEPSPWFPRPINTPQSHFTTRVFKPHHPLPLSLILRLITETTSRLNLQNYSVMEHIPTPTTIKFLYSYGGKILPRATDGELRYSGGHTRVLTIDPSMSFSELMVKLNDLCGSSSVTLKCLLPNGNLETLISITSDEDLANIVEEYDRVSLLLTHPLKIRAILSPLKKLSSSLSSSSSATHSSSGSPHSSAESPPYAVARQFFKPELPPVLYPVGGGYGSVKDSWYPGQFGSPRFLYRGPHSYNYCH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1054 257 CDD PB1_UP2 78 160 - -
Lal19g1054 257 Pfam PB1 domain 91 159 IPR000270 GO:0005515
Lal19g1054 257 SUPERFAMILY CAD & PB1 domains 89 172 - -
Lal19g1054 257 Gene3D - 93 173 - -
Lal19g1054 257 PANTHER OS05G0427100 PROTEIN-RELATED 64 257 - -
Lal19g1054 257 SMART PB1_new 87 167 IPR000270 GO:0005515
Lal19g1054 257 PANTHER PB1 DOMAIN PROTEIN 64 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1054 Lal-Chr19 14314731 14318403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1054 70 160 MAP Kinase Kinase Kinase AT5G57610 41.758 1.08e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1054 - - gmx:100810563 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1054 19 14314731 14318403 Lal19g1054 19 14314731 14318403 ECH
Lal19g1054 19 14314731 14318403 Lal4g0811 4 6863673 6866495 PCT
Lal4g0811 4 6863673 6866495 Lal19g1054 19 14314731 14318403 PCT