Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1027 ATGACCACCACCACCACCAGTCTCACCGGCGGCGGCGGCGGAGGCGGAGGAGAGGATCGTGTCCTTGCGACAGCTCAGCAAATCGTGCAAAGTCTCAACACTCCAAAAGAGGTTCGTGAAGACATGCTCTTAATCTTCAAATCCTTCGATAACCGTCTCTCTGGAATCTCTGACCTAATCAAAGGCCAAGATGAACTTCAACGATTCCAAGCCGCCGAGAAAGTTATTCTCAGCTTCGACTCTTCTCTCTCCTCTGAACCTTCCCACCACTTCGTATCTCTCGATTCGCAAAACGTCGCCGTTGACTACTTCTCCGCCCTCGACGAAATCATCAACTTTATGGACCATTTCTCGATCGATCCGCCACCGTTCGATGACGATAGAAGTGTCCATGTCATGGTGGAGCGTGCTGAGAACGCCATCCAGCTCGCCATGTTGAGGCTTGAGGATGAATTGCATCATGCTTTGATTCGCAATACTGTTCCTCTTAACGCTGAAAGCATCCACAGTTCAGCGAAGAGAATTTCGCTCTCTTTTGCTTCGCACATCGACGAGAATTTGGATAGCTTCGGCGATACTGGCAGTGATCGCGGTTATGATCGGTTTCACTCGCGTGGTACCAGTTTTGGCGATGATGTGGTTGTCGATTTGGTGAATCCTGATGCAGTTTTCGAGTTGAGAGAGATTGTCGATCGAATGGTTAGGTCTGGTTATGAAAGAGAGTGCCTTCAGGTTTATAGTAGTGTTCGTCGTGATGCATTGGATGAGTGTTTGGTAATTCTTGGTGTTGAGAGATTGAGTATTGAAGAGGTTCAGAGGATTGAGTGGAAAAGTTTGGACGAGAAGATGAAGAATTGGGTTAAAGCTGTTAAAATTGCTGTTGGAGTGTTGTTGTGTGGTGAGAAGAGATTGTGTGATAGTGTGTTTGGTGATTTGGATGAGAATTATGAGATGAAGGAGGTTTGTTTTAATGAAACTTCTAAAGGCTGTGTGATGCAGTTGTTGAATTTCGCTGAGGCTGTTTCGATTTGTAAAAGGTCGCCGGAGAAGTTGTTTAGGATATTGGACATGTATGAGGTTTTGAGGGATGCCTTGCCTGATTTGGAGTCTTTGGTTTCGGATGAGTTTGTTATTGGAGAGGTTAGAGGAGTGCTGAGTGGACTTGGTGAGGCCGCAAAAGGGACGTTTGCTGAGTTTGAGAATTGTATTAGAAATGAGACTTCCAAAAGGCAGGTCATAACAGGGGATGTTCATCCGTTATCTCGTTATGTGATGAATTACCTGAAGTTGCTTGTTGATTATGGGGAACATTTGGACTTGCTCTTAGAAATTAGAGACGATGATCTTTATCATTTTCAGAATGATTTTGGTGGTGATGGTTCTCAGTTTGAGTCCATGTCTCCCTTAGGACGTCGGGTGCTGTTACTGATGTCACAGCTTGAATCTAATCTGGGTGAAAAATCAAGACTCTATGAAGACAACGCAATGCAGCATGTATTTTTGATGAACAATCTCCATTACCTTGTGCGAAAAGTGAAAGACTCTGATCTTGGAAAGATATTGGGAGATGATTGGATTCGCAAGCGGGGCGGTCAGATACGCCAGTATGCTACAGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGACGGTACTGGAGGGCACTCTAGTAGTGCATCAAAGATGGCTTTGAAGGAGAAATTCAAGAATTTCAATGCATGTTTTGAAGAAATATATAGGATTCAGACAGCTTGGAAGGTACCAGATGAGCAGCTTCGGGAAGAGCTACGAATATCTATATCAGAGAAGGTGATTCCTGCATACCGCTCATTTTATGGGAGGTTTAGTAGTCAACTAGATGGAAGGCATGTAGGGAGATACATAAAGTATACACCAGATGATTTAGAAACCCATTTATCAAATTTATTCGAAGGAGTCCCTGATGTATTGAATCAGACAAGGAGAAAAGGTACATAG 1992 0.4428 MTTTTTSLTGGGGGGGGEDRVLATAQQIVQSLNTPKEVREDMLLIFKSFDNRLSGISDLIKGQDELQRFQAAEKVILSFDSSLSSEPSHHFVSLDSQNVAVDYFSALDEIINFMDHFSIDPPPFDDDRSVHVMVERAENAIQLAMLRLEDELHHALIRNTVPLNAESIHSSAKRISLSFASHIDENLDSFGDTGSDRGYDRFHSRGTSFGDDVVVDLVNPDAVFELREIVDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRIEWKSLDEKMKNWVKAVKIAVGVLLCGEKRLCDSVFGDLDENYEMKEVCFNETSKGCVMQLLNFAEAVSICKRSPEKLFRILDMYEVLRDALPDLESLVSDEFVIGEVRGVLSGLGEAAKGTFAEFENCIRNETSKRQVITGDVHPLSRYVMNYLKLLVDYGEHLDLLLEIRDDDLYHFQNDFGGDGSQFESMSPLGRRVLLLMSQLESNLGEKSRLYEDNAMQHVFLMNNLHYLVRKVKDSDLGKILGDDWIRKRGGQIRQYATGYLRASWSKALSCLKDDGTGGHSSSASKMALKEKFKNFNACFEEIYRIQTAWKVPDEQLREELRISISEKVIPAYRSFYGRFSSQLDGRHVGRYIKYTPDDLETHLSNLFEGVPDVLNQTRRKGT 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1027 663 SUPERFAMILY Cullin repeat-like 101 649 IPR016159 -
Lal19g1027 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 51 662 IPR004140 GO:0000145|GO:0006887
Lal19g1027 663 Gene3D Exocyst complex component Exo70 75 654 - -
Lal19g1027 663 Pfam Exo70 exocyst complex subunit 284 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal19g1027 663 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 51 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1027 Lal-Chr19 14115848 14117839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1027 19 661 EXO70 exocyst subunit family AT5G50380 57.755 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1027 K07195 - gmx:100809716 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1027 19 14115848 14117839 Lal19g1027 19 14115848 14117839 ECH
Lal14g1463 14 15706837 15708867 Lal19g1027 19 14115848 14117839 LSH
Lal7g0878 7 15325930 15333898 Lal19g1027 19 14115848 14117839 LSH
Lal17g0818 17 6018799 6023878 Lal19g1027 19 14115848 14117839 PCT
Lal4g0686 4 5384525 5389705 Lal19g1027 19 14115848 14117839 PCT