Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1020 ATGGAGAAACACGAATTAGTGTTATTCCCTACCCCATCTGCATCATCTTATGCTTCTGAAATTGATTTTAAAGTTGCTCAAAGCTCTAAGGTTCATGTTAAAAGAGAAGGTTTCTTAAGAACTCAAAAGAAGAAAATATCAAGCCAGAATGGTGGTAAAAAGGTGCAGCATAGATATGTATTTGAAACAAGGAGTGAGATTGATATACTGGACGATGGGTACAAGTGGAGAAAATATGGGGAAAAGAATGTGAAAAACAATAAGTTCTCTAGAAGTTACTACAGGTGCTCTTATCAAGGTTGCAATGTGAAGAAACAAATCCAACGCCATTCCAAGGATGAACAGGTTGTAGTAACAACATATGATGGAATGCATATGCACATGGTTGAGAATTTGACTGAAAGCTTTGACCAGATTTTGAGAAACTTTAACATATACAACCAATCCTATAACCTTCAACGTTAG 465 0.3591 MEKHELVLFPTPSASSYASEIDFKVAQSSKVHVKREGFLRTQKKKISSQNGGKKVQHRYVFETRSEIDILDDGYKWRKYGEKNVKNNKFSRSYYRCSYQGCNVKKQIQRHSKDEQVVVTTYDGMHMHMVENLTESFDQILRNFNIYNQSYNLQR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1020 154 Gene3D WRKY domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g1020 154 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 146 - -
Lal19g1020 154 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1020 154 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1020 154 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g1020 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 146 IPR044810 GO:0003700
Lal19g1020 154 SUPERFAMILY WRKY DNA-binding domain 63 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1020 Lal-Chr19 14061753 14063140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1020 58 147 WRKY Transcription Factor Family AT5G13080 65.556 9.68e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal19g1020 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1020 - - gmx:100127378 192.971