Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1016 ATGGCAAATAAACTTGATATAAGGCAAGGAAAAACTACCCTGGTTAAGCCTGCAAAAGAAACAACAAAGGGTCATTTTTTCCTTTCAAACCTTGACCAGAATGTAGCAGTTCCAGTTCGCACCATTTACTGTTATAAATCCAGTTCTAGAGGCACTAACAATGATGCTGTGGAAGTCATAAAAACTTCACTGTCAAAGGTTCTTGTTCACTATTACCCTTTAGCTGGAAGGTTGGGCATAAGCTCAGAGGGTAAACTTGTAGTGAATTGCACAGGAGAGGGTGTTATGTTTGTTGAAGCTGAAGCAAATAATTGTATGATAGATGATATTGGAGATATGAACAACCCTGACCTTGCTAATCTTGGGAAACTGGTTTATGATATACCTGGTGCAAGGAACATACTTGAGATACCTCCTTTAATAATTCAGGTGACAAAGTTCAAATGTGGAGGATTTGTTTTAGGTGTAAACGTGAACCATTGCATGAATGATGGTTTGAGTGCTATGCAATTTGTGAATGCATGGAGTGAGACAGCCAGAAACTTAGACCTAAAGATTCTACCATTTCTTGATAGAACCATACTCAAAGCACGAAACCCACCAAAAATAGAGTTCCCACACCATGAATATGCTGAAATTAAAGATGTAACAAATACAAGTCATGATGTAGAAGAAAAAATGCTCAACAGGTATTTTCTTTTCACTCAGGAGAAGCTTAATCTGCTTAAGAAAAAAGCCACAGAAGATGGGGTTTTGAAGAAGTGCTCTAGTTTTGAAGCACTTACAGCTTTTGTGTGGAGAGCTAGAACTGAAGCCTTAAGGATGCACCCTGATCAAGAAACTAAGCTACTCTTTGCTGTTGATGGAAGGTCTAGGTTTGTGCCACCAATACCAGAAGGGTATTTTGGTAATGCTATTGTCTTGACAAATGCAATGTGCAAAGCAAATGAGTTATTGAAGAAGCCTTTTTCACATGCAGTAGGGTTAATTGTCAATGCAATTAATATGGTCACAGATAGTTATATGAGATCTGCTATTGACTATTTTGAAGTTAAAAGAACTAGGCCTTCATTAACTGCAACACTTTTGATCACAACTTGGACAAGGTTGTCTTTTCACACTACAGATTTTGGTTGGGGTAAGCCTCATTCTTTTGGGCCTGTGACCTTGCCTGGGAAGGAAGTGATTTTGTTCTTGTCACATAGTGAAGATAAAAGAAGCATTAATGTTCTTGTGTGTTTGCCTGCACCAGCCATGAAAATATTTGAAGCACTTATGGAGATATATATATGA 1293 0.3805 MANKLDIRQGKTTLVKPAKETTKGHFFLSNLDQNVAVPVRTIYCYKSSSRGTNNDAVEVIKTSLSKVLVHYYPLAGRLGISSEGKLVVNCTGEGVMFVEAEANNCMIDDIGDMNNPDLANLGKLVYDIPGARNILEIPPLIIQVTKFKCGGFVLGVNVNHCMNDGLSAMQFVNAWSETARNLDLKILPFLDRTILKARNPPKIEFPHHEYAEIKDVTNTSHDVEEKMLNRYFLFTQEKLNLLKKKATEDGVLKKCSSFEALTAFVWRARTEALRMHPDQETKLLFAVDGRSRFVPPIPEGYFGNAIVLTNAMCKANELLKKPFSHAVGLIVNAINMVTDSYMRSAIDYFEVKRTRPSLTATLLITTWTRLSFHTTDFGWGKPHSFGPVTLPGKEVILFLSHSEDKRSINVLVCLPAPAMKIFEALMEIYI 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1016 430 Pfam Transferase family 11 427 - -
Lal19g1016 430 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 7 427 - -
Lal19g1016 430 Gene3D - 210 427 IPR023213 -
Lal19g1016 430 Gene3D - 4 209 IPR023213 -
Lal19g1016 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1016 Lal-Chr19 14019857 14022215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1016 4 426 Monolignol Biosynthesis Gene Families AT5G48930 38.864 2.37e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1016 K15400 - gmx:100775546 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1016 19 14019857 14022215 Lal19g1016 19 14019857 14022215 ECH