Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1006 ATGGCAAAAGAACAGCAAAAACAGGACACTGCAATCACAACCAACTCTCTTCACCCTCAAACCCAGGGCAAAGTCCCAGAGAAAGAAAAGGAATTGGGGCTCCAAATTGAGGAGGCTGATTCTGAGATTGAGGTTCCTTTGCCTCTAACAGTTACTTCCCGGGCATTGTATATGTTGGAAGATTTCACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAAGCGCACCGCCAAGTATCGATCCCCTGGCTTCCCTCACCGCACTTCCACCGCAATTGCCACTGCCGCAGCCATGTCTTCTAGTTCTAGCGCTGGAGAGTCGATTGAGGATGCAAAATGGAATGTGCATCCTGAGCAAACAGAAATTAGTTTGTGGGAGAGGCTTGGTAAAGCTGCAACATTGGACATTGAATCAAGTTCCTTTTCTTGGGACACACTTACTTCACTTCACCACTCTGAACATACCAGCAGCAACGAACTTTCCGAGGACGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGAGGTGTTGTTTTCTTTGCCTTTTTCAATCACGATGATACATTTCCGAAAGAAGCAGCAGCTGTTATAAAGATCTCATCATCAAGAATGGCAACACAGTCTGAACGCCTTGGCTATGAATTTGCCAAATGGCTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAGTTCAGAGTGGCACCAAATAAAGGAAGCTACAGAAAAAGCTAGTGAGGTAGCATGTTCTGAGGGTGATGAAGTTAGTGAAACGACATGTTTTGAATTTTTGGAAGCACTTGAGCTTAGCCGATGTCTCTTCTTTATGAATTATGTACATGGTTCACCTTTGCTGGAAAGCTCAAGTGCATTTGAGTCACGGGAATCTGCAGAAAGAACGTCTGAAGCTCTTGGCAGGGTACTGATGTTGGACCTTGTCATCAGGAATGAAGATAGGCTCCCGTGCCGTGAGCTTAGGTGGCGTGGGAATTCTGCAAATTTATTGTTAGCTGAAAAGATGACATCTGCAAATACAGATACACTACAAGCAGTTATTGATTCTGCAATTAATCGGTATAGACCAAAGGTGATTAAAGCACTTCAGAAAGAAAGAAGGTCAACTTCTGCAGATAGCAGATTTGATTCTCATAAAGGACCTGTCTTGATATCACAAACCTCTGATCTTACAGAGATCACAGGATCACCAGGATCCACTGACACGATGAGCCTTAAAAGTCAAACATCAGGAGAATCATTGTCTCCTGACTTCAACATTGTAGCCATTGATTCCGGTGTTCCTCGCCGACCTCCTGCTGGGAAGCGTACAAATGATCAGGTTAATTATCCTAAATTGGTTGAGTTGCTTCTCAATAGTTCTGAGTTTGGCTCAAACGTGTTATATGATATAACTGGAGGGAAATTAGGATTTCCAACACCACAAGACATAAATACAACATATATACATGCTTGTGACATGACATCAGTTATTCAAGCATTCCGCACTGGTTTCCGTGGTGCTCTTAGGGATCTGCAGGGATTTCAAATATTCCTTCTCACACTTCACCAAAGACTTGATACCTTGTTCCGATCATTTATGAACATCATAAGCAAAATATCATCAGGGGAATCTGACAAAGATGATCCAATGGTTCCTGACTCACCTTCACTGGCTGCTAGTGGTAGCTGTTCCTCTACACCAAGTAAGGAGAGGTTTTCTAGTGAAAACCATCAAGATTTTACAGATTCAGAGTCACAAAAGTCTGCTTCAAGGTCATCATCTTCAGGCAATAGAGATTGTTGTGACACTGCTTCAACTGTGTCAAGGGAAAGTTGGCATGGAAAGTTCAATAAAGGAAGTGGGGGGGAGCAACTTCGTAGTCTCCGCTTGACAGCTAGGCTCCGTGACTTCAATAAATTTTTCAAGGTTGATGCTGAATCTAATAAAGAATTGGAGCAGTGGAATGAAATGCTTAAAAGTGATGCCATCAAACTATGTCAGGAGAACAATTTCAATCCAGGATTTTTCGAGGGTAGTGATAATAACAGTGTTGTTGATGCTTATGAACTTAAGGTCAGACTTGAGCATATCCTTGAGAGAATTGCATTGATATCTGAGGCTGCAAGTACAGAGAGACCATCTGCTGTTACAAGTAGTTTGTTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAATACTTTGGAATCACACATATTTTGTGTCTCTGTACCAATGAAATTGGACAGTCAGATTCACAGTTTCCTGATCTATTTGAGTACAAAAATTTCTCTAAGGTGTGTGACAATGAAGATTTTAACATCAGTAGCATATTTGAAGAAGCTTGTGATTTTATAGATTATGTTGAACAAACGGGTCAGAAGGTCTTAGTTCACTGCTTTGAGGGGAGAAGCAGAAGTGCTACCTTGGTCCTTGCTTACTTGATGCTCAGGAAGAAGTTCACTCTATTGGAAGCATGGAATGCTCTGAAACGAGTTCACCGTCGTGCACAGCCCAACGATGGTTTTGCAAAGATCTTACAGGAACTGGATCAGACACTGCATGGGAAGATTTCAATGGAGTGGCAACAGCGAAAACCGACGATGAAAGTTTGCCCCATCTGTGGGCAGAATGCTGGACTAAGCAGCAGTTCACTTAAGCTACATTTGCAGAAATCACATAGAAAACTATCATCTGGGAGTGTAGATAGTGCTATGACAATGGAGATACAAAAGGCATTGACAGCTTTGAAGATTAGCCGTGGTGGGAGTGTCAGCCCCACACAAAGGTCGTCTCATTCAATAATAGATGAATAG 2844 0.4269 MAKEQQKQDTAITTNSLHPQTQGKVPEKEKELGLQIEEADSEIEVPLPLTVTSRALYMLEDFTAGPAFRFTQWLQLVRKRTAKYRSPGFPHRTSTAIATAAAMSSSSSAGESIEDAKWNVHPEQTEISLWERLGKAATLDIESSSFSWDTLTSLHHSEHTSSNELSEDEMNKALEVTVNSGGVVFFAFFNHDDTFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSSEWHQIKEATEKASEVACSEGDEVSETTCFEFLEALELSRCLFFMNYVHGSPLLESSSAFESRESAERTSEALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMTSANTDTLQAVIDSAINRYRPKVIKALQKERRSTSADSRFDSHKGPVLISQTSDLTEITGSPGSTDTMSLKSQTSGESLSPDFNIVAIDSGVPRRPPAGKRTNDQVNYPKLVELLLNSSEFGSNVLYDITGGKLGFPTPQDINTTYIHACDMTSVIQAFRTGFRGALRDLQGFQIFLLTLHQRLDTLFRSFMNIISKISSGESDKDDPMVPDSPSLAASGSCSSTPSKERFSSENHQDFTDSESQKSASRSSSSGNRDCCDTASTVSRESWHGKFNKGSGGEQLRSLRLTARLRDFNKFFKVDAESNKELEQWNEMLKSDAIKLCQENNFNPGFFEGSDNNSVVDAYELKVRLEHILERIALISEAASTERPSAVTSSLFIGGALAARSVYTLQYFGITHILCLCTNEIGQSDSQFPDLFEYKNFSKVCDNEDFNISSIFEEACDFIDYVEQTGQKVLVHCFEGRSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRAQPNDGFAKILQELDQTLHGKISMEWQQRKPTMKVCPICGQNAGLSSSSLKLHLQKSHRKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRSSHSIIDE 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1006 947 ProSiteProfiles Dual specificity protein phosphatase domain profile. 719 865 IPR020422 GO:0006470|GO:0008138
Lal19g1006 947 Gene3D - 291 400 IPR036940 GO:0016301
Lal19g1006 947 MobiDBLite consensus disorder prediction 1 30 - -
Lal19g1006 947 SMART dsp_5 719 862 IPR020422 GO:0006470|GO:0008138
Lal19g1006 947 MobiDBLite consensus disorder prediction 404 426 - -
Lal19g1006 947 MobiDBLite consensus disorder prediction 564 578 - -
Lal19g1006 947 Pfam Actin-fragmin kinase, catalytic 126 403 IPR015275 -
Lal19g1006 947 SUPERFAMILY Protein kinase-like (PK-like) 72 453 IPR011009 -
Lal19g1006 947 CDD DSP 720 858 - -
Lal19g1006 947 ProSitePatterns Tyrosine specific protein phosphatases active site. 807 817 IPR016130 GO:0016311|GO:0016791
Lal19g1006 947 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 719 865 IPR029021 -
Lal19g1006 947 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 25 947 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lal19g1006 947 MobiDBLite consensus disorder prediction 549 609 - -
Lal19g1006 947 Pfam Dual specificity phosphatase, catalytic domain 738 860 IPR000340 GO:0008138|GO:0016311
Lal19g1006 947 MobiDBLite consensus disorder prediction 1 22 - -
Lal19g1006 947 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 25 947 - -
Lal19g1006 947 Gene3D Protein tyrosine phosphatase superfamily 694 866 IPR029021 -
Lal19g1006 947 MobiDBLite consensus disorder prediction 592 609 - -
Lal19g1006 947 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 789 841 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1006 Lal-Chr19 13924267 13934170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g1006 27 931 Protein tyrosine phosphatase (PTP) family AT5G23720 62.801 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1006 K14165 - gmx:100791993 1373.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1006 19 13924267 13934170 Lal19g1006 19 13924267 13934170 ECH
Lal7g0857 7 15132360 15138788 Lal19g1006 19 13924267 13934170 LSH