Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g1001 ATGGCATTAAACTCTGAGAAAATTGATGAGGTTATTCCTCTTGTTTCCATTGATTCTCCAATAGCAACACCAGTTGAAAAACAACGAACAACAGAAGAAGTTGTTGATCCCAAAAGTGAAAGAGTCAAAGCCACAAGACACCCAAGGTGGACAAGACAAGAAACAATTATTCTCATTGAGGCCAAGAAAATGGTGGAAAATGGAGAACAACTTTGTCGATTCAAATCATCATCTGGACTTGTTAACCACACTGATCTGAAATGGGACATGGTATCATCATTTTGTCAGCAACAAGGTGTGGAAAGAGGACCTATCCAATGCAGAAAAAGATGGGGAAATCTTCTCACTGATTTCAGGAAGATCAATAAGTGGGAGTCAAGTATAAAGGATGAAGGTGAATCTTTTTGGATTATGAGGAATGATAAAAGGAAAGAAAACAAGTTACCAGGGTTTTTTGATGAAGTAGTGTATAGAGTTTTAGATGGTGGGGTATTGAGTGCTTCTGCATTGCCTTTGAATTTGATTAAGATGGCACCAAAACAAGAGAATGGTGTTGATTATGTTGAAGGAGTGGGGCTATTAGAGGAATGTAAAGATGATGTGGATGAAGAAGATGAAGATGATGAAGATATAGTTGATAGTGAGAAAATGAGTTGGAGAACAGAAAACATATTTGAGACAAATATTGCAAGAAATATATTATCCAGTCCAATGAAAACCCTAGCTTCTAAGGGAACATTCCATAGAGGGAGTATCAAAATAACACCAACACTTACCCTACCAACTCCTGGCTGCCAGAGAGAACCTATGTCTCAAGAGGGATACAAGAGAAAGAGATTTTCACCAGACAATAGTGAAGACACCACAGATTTCAGTAATAATATTATCAAAGTTCTAAGGAGGAACACTAACATGATGAAAACCTATCTTGGAGCTCAGAACATGAATCACCAATTGGCCATTGAGCAACAGAAGGAACAATCAAACACCTTAGTTGCAGCCCTTGGCAAGGTCACAGATGCTTTGACAAAAATTGCTGACAAGTTATAA 1050 0.379 MALNSEKIDEVIPLVSIDSPIATPVEKQRTTEEVVDPKSERVKATRHPRWTRQETIILIEAKKMVENGEQLCRFKSSSGLVNHTDLKWDMVSSFCQQQGVERGPIQCRKRWGNLLTDFRKINKWESSIKDEGESFWIMRNDKRKENKLPGFFDEVVYRVLDGGVLSASALPLNLIKMAPKQENGVDYVEGVGLLEECKDDVDEEDEDDEDIVDSEKMSWRTENIFETNIARNILSSPMKTLASKGTFHRGSIKITPTLTLPTPGCQREPMSQEGYKRKRFSPDNSEDTTDFSNNIIKVLRRNTNMMKTYLGAQNMNHQLAIEQQKEQSNTLVAALGKVTDALTKIADKL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g1001 349 ProSiteProfiles Myb-like domain profile. 49 115 IPR001005 -
Lal19g1001 349 Gene3D - 50 120 - -
Lal19g1001 349 MobiDBLite consensus disorder prediction 258 290 - -
Lal19g1001 349 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 31 349 - -
Lal19g1001 349 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 31 349 - -
Lal19g1001 349 MobiDBLite consensus disorder prediction 271 285 - -
Lal19g1001 349 Pfam Myb/SANT-like DNA-binding domain 48 128 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g1001 Lal-Chr19 13877393 13879042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g1001 - - lang:109338322 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1001 19 13877393 13879042 Lal7g0853 7 15091492 15094304 ECH
Lal19g1001 19 13877393 13879042 Lal19g1001 19 13877393 13879042 ECH
Lal14g1423 14 15477095 15478965 Lal19g1001 19 13877393 13879042 LSH
Lal7g0853 7 15091492 15094304 Lal19g1001 19 13877393 13879042 LSH