Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0996 ATGGAATCAGACGCATTTACTTCCACCCTTTTCAAGTGGGACCCACGTACCGTCCTTCCAACTCCTCCTCCTCCCAACCGCCACCAGATTCTGGACTACACCGTTGCCCCTCCGGTGGCTCATCCGCCGAGATCGCTACTGGGTGGTCTAGAGGACGTTTTCCACGCTTACGGCGTCAGGTACTACACGGCGGCGAAGGTAGCGGAGCTTGGGTTCACGGCGAGCACCCTTGTGGATATGAAGGATGAGGAGCTTGATGACATGATGAACAGCCTCTCACAAATTTTTCGTTGGGATCTCCTCGTTGGAGAGCGTTATGGCATCAAAGCCGCCGTTAGAGCTGAGCGAAGACGCCTTGACGACCAGGAAATGAAGCGGCGCAACCTACTAACCGCCGATATCACCACCACCAACGCTCTTGATGCTCTCTCTCAAGAAGGGTTGTCGGAAGAGCCAGTAGTGCAACAAGAAAAAGAAGCAGTAGGGAGCACATGGGAGGTGGTTGTGGCGGCGGAGAGGAGGAAGCAGCAACAAAGGAGGAGGAGAACAAGAATGAAAGTGAATAATCATCATAATGAGAATGAAGATCCTGAAGATGAGGAAGGAGAAGAAGATGAAGAAGGGAACAATAATGGTGGTGAGAGACAGAGAGAGCACCCATTCATTGTGACGGAGCCTAGGGAGGTTGCACGTGGCAAGAAGAACGGTTTGGATTATCTCTTTCATCTCTATGAGCAATGCCGTGAGTTCTTGATCCAGGTTCAGCATATCGCCAAGGACCGTGGTGAAAAATGCCCTACCAAGGTGACAAACCAAGTATTCAGGTTCGCTAAGAAAGCAGGAGCTAGCTACATTAACAAACCCAAAATGCGTCACTACGTGCACTGTTACGCGTTGCACTGTCTTGACGAAGAAGTATCGAATGAACTAAGAAGGGCATTCAAAGAGAGAGGAGAAAACGTTGGTGCATGGAGACAAGCATGTTATAAACCACTTGTTGAAATAGCTTCACTTCAAGGTTGGGACATTGATGCTATATTCAATGCACATCCTCGTCTTTCAATATGGTATGTTCCAACAAAGCTTCGTCAACTTTGTCATGCTGAAAGGAACACCAATGCTGCATCTAGTTCTGTCTCTGTTGTCACCACTCACCTTCATAATTTCTAA 1170 0.4855 MESDAFTSTLFKWDPRTVLPTPPPPNRHQILDYTVAPPVAHPPRSLLGGLEDVFHAYGVRYYTAAKVAELGFTASTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDDQEMKRRNLLTADITTTNALDALSQEGLSEEPVVQQEKEAVGSTWEVVVAAERRKQQQRRRRTRMKVNNHHNENEDPEDEEGEEDEEGNNNGGERQREHPFIVTEPREVARGKKNGLDYLFHLYEQCREFLIQVQHIAKDRGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVEIASLQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNTNAASSSVSVVTTHLHNF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0996 389 MobiDBLite consensus disorder prediction 172 224 - -
Lal19g0996 389 MobiDBLite consensus disorder prediction 209 224 - -
Lal19g0996 389 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 208 374 IPR035209 GO:0003677
Lal19g0996 389 Pfam Floricaula / Leafy protein SAM domain 47 123 IPR035079 -
Lal19g0996 389 Gene3D Protein LEAFY 211 380 IPR038276 -
Lal19g0996 389 PANTHER PROTEIN LEAFY 1 385 IPR002910 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0996 Lal-Chr19 13836063 13839093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0996 1 371 Orphan Transcription Factor Family AT5G61850 65.140 8.16e-159 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lal19g0996 C_LFY_FLO 4.3e-106 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0996 - - gmx:100798196 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0996 19 13836063 13839093 Lal19g0996 19 13836063 13839093 ECH