Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0974 ATGACTCACTCAAATTTTAGTTATGATCCTCTCAAAATATTGCTGAGATGGTTATTATTTCTTAGTGTCTTCAAACTCAGTTATGCAATCAAGGATCCTGATGTGGAAGGAGAGGCTCTGCTAGATTTGTTGAATTACCTAAATGATTCCAATAATCAAATAGATTGGGATAGTCATTTGGTTAGTCCATGCTTTAGTTGGTCTCATGTCACTTGCAGAAATGGACATGTTATATCTTTGACCCTGGCTTCCCTTGGATTTTCTGGAACACTGTCTCCCTCAATTGCAAAGTTGAATTACTTGGTTAGCTTGGAATTACAGAACAACAATCTTTCAGGTTCTTTACCTGATTATATTGCCAACTTGACAAATCTACAATATCTGAATCTTGCTGACAATAATTTTAAGGGTTCTATACCAACTACATGGAATCAACTATCCAGTTTAATGCATCTAGATCTTTCATCAAATGATCTTACTGGAAGTATTCCAATGCAACTGTTTTCAGCTCCAATGTTCAACTTTTCAGATACACACCTTCATTGTGGAGAGGGCTTTGAGCAGTCTTGTGTTCCTAAATCTGACCATCCAGCTTCAACCTATAAATCAAAACACACCAATGTTGTACGTTTTGCAAGTTGTGGTGCATTTGCAATTCTTTGTCTTGGAGCTATCTTTTCATATAGGTACCATCAAATGCACAGACACAAAAGTGATATCTTTGCCAATGTTTCAGGTGAAGATGAGAGAAAAATTTCTTTTGGGCAACTGAGAAGATTTTCTTTGCGTGAACTCCAAGTTGCTACTAAGAATTTCAGTGAAAGCAATGTAGTTGGGCAAGGAGGATTTGGAAAAGTTTACAAAGGAATACTATCAGATAATACAAAAGTTGGTGTGAAACGCCTCTCTGATTATAATAACCCTGGTGGAGAGGCTGCATTTGAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAATCTTTTGAGACTCATAGGGTTCTGTACTACTACAACTGAAAGAATCCTTGTCTATCCTTTCATGAAAAATCTAAGCGTAGCGTATCGATTGAGAGATTTAAAATCTGATGAGAAAGGTTTGGACTGGGCAACAAGGAAAAAGGTGGCTTTTGGTACAGCCCATGGTTTGGAGTATCTACATGAACAATGCAATCCTAAGATAATACATCGCGATCTAAAGGCTGCAAATATCCTACTAGATGATGAATTTGAAGCTGTTCTAGGTGATTTTGGACTAGCCAAGTTGGTTGATGCAAGAATGACTCATGTTACCACTCAAGTGAGGGGCACAATGGGTCACATTGCTCCAGAATATTTGTCAACTGGGAAATCATCAGAAAAAACAGATGTTTTTGGATATGGTATAACACTTCTTGAACTAGTCACAGGTGAACGCGCAATCGAGCTTTCACGCCTTCAAGAGGAAGAGGACGTTCTTCTCATCGATCATGTGAAAAAGCTAGTTAGAGAAAATAGGGTAGGGGACATTGTGGATAAGAATTTGGAGAATTATGATACAAAAGAAGTTGAGACAATTATTCAAGTTGCATTGCTTTGTACACAAGGTTTTCCAGAGGATCGTCCAACAATGTCAGAGGTATTGAAAATGCTACAGGGAATTGGTTTAGCAGATAAATGGGCAAATTGGAAGCAACTTGAAGAGACTAGGAATCAAGAATTCTCACTCATGACTCATCAATTTGTTTGGAGTGATGAATCCACTTTTGATCAAGAGACTATACATCTTTCCAAAGCAAGATAG 1785 0.3765 MTHSNFSYDPLKILLRWLLFLSVFKLSYAIKDPDVEGEALLDLLNYLNDSNNQIDWDSHLVSPCFSWSHVTCRNGHVISLTLASLGFSGTLSPSIAKLNYLVSLELQNNNLSGSLPDYIANLTNLQYLNLADNNFKGSIPTTWNQLSSLMHLDLSSNDLTGSIPMQLFSAPMFNFSDTHLHCGEGFEQSCVPKSDHPASTYKSKHTNVVRFASCGAFAILCLGAIFSYRYHQMHRHKSDIFANVSGEDERKISFGQLRRFSLRELQVATKNFSESNVVGQGGFGKVYKGILSDNTKVGVKRLSDYNNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTTTERILVYPFMKNLSVAYRLRDLKSDEKGLDWATRKKVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDARMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGERAIELSRLQEEEDVLLIDHVKKLVRENRVGDIVDKNLENYDTKEVETIIQVALLCTQGFPEDRPTMSEVLKMLQGIGLADKWANWKQLEETRNQEFSLMTHQFVWSDESTFDQETIHLSKAR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0974 594 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lal19g0974 594 Pfam Protein kinase domain 273 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0974 594 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Lal19g0974 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Lal19g0974 594 PANTHER LRR RECEPTOR-LIKE KINASE 12 594 - -
Lal19g0974 594 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 594 - -
Lal19g0974 594 SMART serkin_6 272 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0974 594 ProSiteProfiles Protein kinase domain profile. 272 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0974 594 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Lal19g0974 594 Gene3D Transferase(Phosphotransferase) domain 1 349 565 - -
Lal19g0974 594 SUPERFAMILY Protein kinase-like (PK-like) 251 546 IPR011009 -
Lal19g0974 594 SUPERFAMILY L domain-like 37 170 - -
Lal19g0974 594 Gene3D Phosphorylase Kinase; domain 1 241 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0974 Lal-Chr19 13668931 13674543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0974 33 594 Receptor kinase-like Gene Family AT5G10290 55.008 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal19g0974 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0974 - - gmx:100800886 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0974 19 13668931 13674543 Lal19g0974 19 13668931 13674543 ECH
Lal7g0839 7 15012812 15017319 Lal19g0974 19 13668931 13674543 LSH