Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0968 ATGTCATCCATTGCTGTAACTGCATCAGCCACAACATCACTCTTCGCTTTTCACCGCGGGGCGAAGCAATGGAACAAGATAATTCCGAGTTATTGGAGAAGAAGCAGTGGAGTCCATTCATCATTATTCGCTAATTCTCACAGGAAACCCTTGCAATTGCGATTCTCAACTTCAGCGGCAAGTGAGAGCAATGGAAGTGTTTCGGAAGAGATAAGTGGAAGTGAAAAATTGCCGATCAATTTTGTCTGGTCTGATAATAAGAAGCCTAGGGTTTGTATATTAGGCGGTGGATTCGGTGGTTTGTATACTGCTTTAAGGTTGGAATCACTCGAGTGGCCTGATGACAAAAAACCACAGATTGTTCTTGTCGATCAGTCTGAACGCTTTGTTTTTAAGCCAATGTTGTATGAGCTTCTCTCTGGAGAAGTGGAGGAATGGGAAATAGCTCCTCGTTTCTCGGATTTGCTGGCAAACACTAGTGTGCAGTTTTTCAAAGACAGGGTAACACTTTTGCAACCCTCTGATCATTTGGGATCCAACGCCTCTAGCTGTGGGGGAACTGTTCATCTTGATAGTGGACTTCTTATTGAATATGACTGGTACGATCTGCACTATTTAACCAGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTGGATGTTGTACCAGGAGCAGCAGAGTTTGCATTTCCATTCACAACACTAGAGGATGCACGAAAAGTTAATGGTAAATTAACAACATTAGAGAGAACGACCTTTGGTAAGGACTTCCAAATTAGTGTGGCCATTGTTGGTTGTGGATACTCTGGAGTTGAATTAGCTGCAACAGTAGCAGAGCGATTACAGAATAAGGGAATTGTTAGAGCAATTAATGCTGATCCAATTATTTGCCCAAATGCCCCACCCGGCAATAGGGAAGCTGCACTGAATGTTCTTTCATCTAGGAAGGTTGAACTTTTGTTGCCTTATTTTGTTCGCTGTATTCGGAGGGTGAGTGAATCAGACTCGTCAGATACCTTGGCTGGGGTAGATGAAAATCACATTGAGAAATATATATTGGAGCTGCAACCTGCTGAAAGGGGGATGCAAAGTAAAATCATTGAAGCAGATCTAGTGTTGTGGACTGTTGGATCTAAGCCTCCTCTCCCTCAGCTGGAACCTTCAGATTTTCCGTTTGTACTTCCACTTAATGCCCGGGGACAAGCTGAAACAGATGAAACCCTACGTGTTAAGGGTCACCCACGGATATTTGCTCTTGGTGACTCTTCTGCGTTGAGGGATTCTAATGGAAGGATTCTTCCAGCCACTGCACAGGTCGCTTTTCAGCAAGCGGATTTCACAGGTTGGAATCTGTGGGCCTCAATTAATGGGCGACCCCTTTTACCATTTAGGTTTCAGAATTTAGGAGAGATGATGACCCTCGGTAGATATGACGCTGCCATTTCTCCTAGTTTCGTTGAGGGGCTAACCTTGGAAGGTCCTTTTGGCCATACTGCCAGGAAGTTAGCATATTTGATCAGGTTACCAACAGATGAACATAAACTTAAAGTGGGGATTAGCTGGCTTACAAAATCTGCTATTGATTCAGTCTCATTCCTACAAAGTACCTTAACCAAGGTCCTCTCCAACTCATAG 1635 0.4391 MSSIAVTASATTSLFAFHRGAKQWNKIIPSYWRRSSGVHSSLFANSHRKPLQLRFSTSAASESNGSVSEEISGSEKLPINFVWSDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIVLVDQSERFVFKPMLYELLSGEVEEWEIAPRFSDLLANTSVQFFKDRVTLLQPSDHLGSNASSCGGTVHLDSGLLIEYDWYDLHYLTRLVLALGAEAKLDVVPGAAEFAFPFTTLEDARKVNGKLTTLERTTFGKDFQISVAIVGCGYSGVELAATVAERLQNKGIVRAINADPIICPNAPPGNREAALNVLSSRKVELLLPYFVRCIRRVSESDSSDTLAGVDENHIEKYILELQPAERGMQSKIIEADLVLWTVGSKPPLPQLEPSDFPFVLPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWASINGRPLLPFRFQNLGEMMTLGRYDAAISPSFVEGLTLEGPFGHTARKLAYLIRLPTDEHKLKVGISWLTKSAIDSVSFLQSTLTKVLSNS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0968 544 PRINTS Pyridine nucleotide disulphide reductase class-I signature 90 112 - -
Lal19g0968 544 PRINTS Pyridine nucleotide disulphide reductase class-I signature 260 285 - -
Lal19g0968 544 PRINTS Pyridine nucleotide disulphide reductase class-I signature 416 423 - -
Lal19g0968 544 SUPERFAMILY FAD/NAD(P)-binding domain 88 466 IPR036188 -
Lal19g0968 544 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 542 - -
Lal19g0968 544 Pfam Pyridine nucleotide-disulphide oxidoreductase 90 444 IPR023753 GO:0016491
Lal19g0968 544 PRINTS FAD-dependent pyridine nucleotide reductase signature 91 110 - -
Lal19g0968 544 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Lal19g0968 544 PRINTS FAD-dependent pyridine nucleotide reductase signature 260 278 - -
Lal19g0968 544 PRINTS FAD-dependent pyridine nucleotide reductase signature 369 385 - -
Lal19g0968 544 SUPERFAMILY FAD/NAD(P)-binding domain 88 281 IPR036188 -
Lal19g0968 544 PANTHER ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIAL 1 542 - -
Lal19g0968 544 Gene3D - 86 517 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0968 80 445 Chloroplast and Mitochondria Gene Families AT4G21490 22.310 4.13e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0968 K17872 - gmx:100795521 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0968 19 13617649 13622591 Lal19g0968 19 13617649 13622591 ECH