Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0964 ATGCAAGGTGAATTAGTATTACCACCAGGATTCAGATTTCACCCTACCGATGATGAGTTGGTGAATCATTACTTATGTAGAAAATGTGCTTCTCAGTCCATTTCTGCCCCTATCATCAAAGAAATTGATTTGTATAAGTTTGATCCATGGCAACTTCCAGAAATGGCTCTTTATGGTGAAAAAGAATGGTACTTCTTTTCTCCCCGGGACCGAAAATATCCAAACGGCTCACGCCCGAACCGTGCGGCTGGGACCGGGTATTGGAAGGCCACCGGAGCTGACAAGCCTATCGGAAAGCCGAATGTACTTGGGATCAAGAAGGCTCTTGTGTTCTATGCAGGCAAAGCTCCTGGAGGAGTCAAAACTAATTGGATTATGCATGAATATCGCCTCGCCAATGTTGATAGATCCGCTGGCAAGAAAAATAACTTGAGGCTTGATGATTGGGTGTTGTGTAGAATTTACAACAAGAAAGGGAAGATTGAGAATTTCAACATGGTGGATCAGAAAGCACTGGTATCAAAGGTTTCAGAGGAAGTTGTTCAATATGAGTATGAGCATGATGAGAACGAGATTAAGCCAGAGATTGAGAACATCTATGGCCAGATTGATTTCAAGAATGACCAGTTGCATATGGACACGTCGGATTCGATGCCGAGGTTGCACACAGATTCCAGCTGCTCGGAGCATGTGGTTTCGCCGGATGTCACATGCGACAAGGAAGTGCAGAGTAAGCCAAAGTGGAATGAACTTGAGCAAGGACCAGCCTTTGATTTTCAGTTCAATTTCATGGACAGTGAAATAAACATGCCACCAGATGACCCTTTTGCCCCTCAGTACCAAATAAACCAGCCTTCCCCATTCCAGGACATATTGATGTTCTTTCAACCGTAA 894 0.4418 MQGELVLPPGFRFHPTDDELVNHYLCRKCASQSISAPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPNVLGIKKALVFYAGKAPGGVKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGKIENFNMVDQKALVSKVSEEVVQYEYEHDENEIKPEIENIYGQIDFKNDQLHMDTSDSMPRLHTDSSCSEHVVSPDVTCDKEVQSKPKWNELEQGPAFDFQFNFMDSEINMPPDDPFAPQYQINQPSPFQDILMFFQP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0964 297 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lal19g0964 297 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 273 - -
Lal19g0964 297 PANTHER NAC TRANSCRIPTION FACTOR 56 5 273 - -
Lal19g0964 297 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Lal19g0964 297 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Lal19g0964 297 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0964 Lal-Chr19 13596933 13599215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0964 1 290 NAC Transcription Factor Family AT5G08790 61.667 1.45e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal19g0964 NAM 9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0964 - - gmx:100170751 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0964 19 13596933 13599215 Lal19g0964 19 13596933 13599215 ECH
Lal14g1393 14 15239479 15241329 Lal19g0964 19 13596933 13599215 LSH
Lal7g0837 7 14986117 14988131 Lal19g0964 19 13596933 13599215 LSH