Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0959 ATGAACTTATCCGACCATGGCGGAGACGGCGGTGGAGGCCGGAAGGTGTTAGTAGGAGTCAAGTTGGACCACCGGAGCCGGGAACTGCTGACCTGGTCTCTCGTTAAAGTTGCCGAGCCTGGTGACCTTGTCATTGCGCTTCACGCCATCGACACCGTCACTGAGGATGATACAGCGTCGCTTCTCTCTATTGTGAAGACTTTCGATTCAGTTCTCGCGGCGTATAAAGGCTTCGGCAACTTGAAACAGGTTGGTTTGGAGCTTAAAGTGTGTAGAGGTGCGTCAGTACGGAAGCTTGTGGTGCAGGAGGCGAAATCGCTTGACATTGTGACGGTGATTCTGGGAACGTCGAAGACATCTCATCCGATCAAGTCTTCATCATCGGTTGCCAAATATTGTGCAAAGAAATTGCCCAAGTGTATCTCTGTTTTCGCCGTGGGCAATGGCAAAGTTGCATTCCGCAGAGAAGCTACTGGAATGTGTGAACGTCAAGTAAAATTAAATGAAAGCCCCAAATTGTTGAACAATTCTTTGGCTGCTTATACAAAGAAAAGACTAAAGAATTGTGAATGCTGTACATGGGGGTTAGCATCGCTAGAAAACTCTGCAACTAAACTCAGTCAAGGGTTTACTAATGGTTATGAAGAGGAAAGTTCTCTGGCATTGATACCAATCCAAAAGCTTGATGATGTTCCTAGTGATTCAGTTGTGGTGTGCAAATCAAACCGGTCAAAACCTGCTTGGTCACTTCTTCGCAAGGTGTTTCTGCCCAAAAATCATAAGCAGAAATCTCCTGTAGAAAATTCACCTGTTTTTCAACAGGCATCAAGACAACCCAACTGCCATTCTTCAGATGTAGTCCATCAAGATAACAAATTGAAAACTGGCCAGAATGACAATTCCACTCTGGATGGGGAGAGTGGTGCCATTGTGCCATTTGGATCCGATGATATCATTCTTCCTCCCTCACTTTGCAGTGATTTGAGTGGTCTTGCTAAAGATTTGTTGGTCTTGCGAGAGAAGTACTCATCTACATGCAGGTTATATAGTTTCCAGGAACTTGTATCTGCAACTGCAAACTTCTCCCACGAAAATTTGGTTGGAACAGGTGGTTGTAGCCATGTTTACCGAGGATGTCTTCTTGATGGCAAGGAATTGGCCATAAAAAGTTTGAAGTCATCTGAAGATGTGATAAAGGAATTTGTTCATGAAATTGAGATGGTCACAACTTTGCATCACACGAACATAATAACTCTATCTGGCTTTTGTTATGAGGGCAATAATTTACTACTGGTATATGATCTTTTATCAAGGGGAAGCCTAGAACAGAACCTTTATGGCAACAAGAACAACTGTAATGCATTCGGATGGCAAGAGAGGTACAAGGTAGCTGTGGGTGTAGCCGCAGCATTGAACTATCTGCATAATGGCTGTACACATGCTGTGATCCACAGGGATGTGAAATCTTCAAACATCCTTCTTTCTGATGATTTTGAGCCTCAGTTATCCCTATCTTTAAGCTGTGTTTGTCTTCAGCTCTCAGATTTCGGACTGGCTAGTCGTGGCTCTTCATCGCATAGCATTTGTACCGATGTAGCTGGAACTTTTGGATACCTAGCTCCTGAATACTTCATGCATGGTAGAGTGACTGACAAGATTGATGTATATGCTTTTGGTGTTGTACTCCTCGAGCTTCTCTCAAGTAAGAAGCCGATTAATAACGAATCTCCTAAGGGCCAAGAGAGCCTTGTTATGTGGGCAACACCGATTTTGAAGGATGGGAAACTTTCGCAGTTGCTTGATCCAAGCCTAGGCAGTGACTACAACCATTGCCATATAGAAAGAATGGTTTTGGCTGCTACTCTTTGCATTAGACGATCACCTAGATTGCGACCTCAAATCTGCCTTTTGTTGAAACTCCTACATGGTGATGTAGAAGTAACAAGATGGGCAGAACAAGAAGTTCGTGTATCACATGAACTTGTTGATGGATGTGATGGAGAACTAGTTTCAAACAATATTCTGTCCCACCTTAACCTTGCTTTGCTGGACTTGGAGGATGATACAGATTCTATTAGCAGCACCGAGCAGACTCTCTCATTTGAGGACTACTTGAGGCGTAGATGGAGTGCCTCATCAAGTTTTGGTTAA 2151 0.4375 MNLSDHGGDGGGGRKVLVGVKLDHRSRELLTWSLVKVAEPGDLVIALHAIDTVTEDDTASLLSIVKTFDSVLAAYKGFGNLKQVGLELKVCRGASVRKLVVQEAKSLDIVTVILGTSKTSHPIKSSSSVAKYCAKKLPKCISVFAVGNGKVAFRREATGMCERQVKLNESPKLLNNSLAAYTKKRLKNCECCTWGLASLENSATKLSQGFTNGYEEESSLALIPIQKLDDVPSDSVVVCKSNRSKPAWSLLRKVFLPKNHKQKSPVENSPVFQQASRQPNCHSSDVVHQDNKLKTGQNDNSTLDGESGAIVPFGSDDIILPPSLCSDLSGLAKDLLVLREKYSSTCRLYSFQELVSATANFSHENLVGTGGCSHVYRGCLLDGKELAIKSLKSSEDVIKEFVHEIEMVTTLHHTNIITLSGFCYEGNNLLLVYDLLSRGSLEQNLYGNKNNCNAFGWQERYKVAVGVAAALNYLHNGCTHAVIHRDVKSSNILLSDDFEPQLSLSLSCVCLQLSDFGLASRGSSSHSICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSSKKPINNESPKGQESLVMWATPILKDGKLSQLLDPSLGSDYNHCHIERMVLAATLCIRRSPRLRPQICLLLKLLHGDVEVTRWAEQEVRVSHELVDGCDGELVSNNILSHLNLALLDLEDDTDSISSTEQTLSFEDYLRRRWSASSSFG 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0959 716 MobiDBLite consensus disorder prediction 261 304 - -
Lal19g0959 716 MobiDBLite consensus disorder prediction 262 304 - -
Lal19g0959 716 Gene3D Phosphorylase Kinase; domain 1 332 435 - -
Lal19g0959 716 SUPERFAMILY Protein kinase-like (PK-like) 342 641 IPR011009 -
Lal19g0959 716 Pfam Universal stress protein family 14 139 IPR006016 -
Lal19g0959 716 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 139 - -
Lal19g0959 716 Pfam Protein kinase domain 363 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0959 716 ProSiteProfiles Protein kinase domain profile. 361 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0959 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Lal19g0959 716 SMART serkin_6 361 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0959 716 CDD USP_Like 15 141 - -
Lal19g0959 716 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 10 710 - -
Lal19g0959 716 Gene3D Transferase(Phosphotransferase) domain 1 436 659 - -
Lal19g0959 716 PANTHER OS01G0253100 PROTEIN 10 710 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0959 Lal-Chr19 13560921 13565331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0959 348 634 Trihelix Transcription Factor Family AT1G68690 41.980 1.79e-67 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal19g0959 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0959 - - gmx:100815722 940.643