Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0948 ACTAAAAAGGAATACCAAATTATAATATATAAGATGGCTAGTGGAATCATCAACCTTCCTCCTGGGTTTTGTTTTTCTCCAACAGATGAACAACTTGTCCTTAACTTTCTCTATTCAAAGGATTCTTTACCTTGTTATTCCAACATCATCCCTGATCTTCATATGTCTCTGTCTGATCCTTGGGAATTAAATGGTAAGGCGTTGAGAAGTGGAGATGAATATTATTTCTTCACAAAAGTGAAGGAAAACAAAACCACAGAAAATGGTTATTGGAATGAAATAGGTGTCAATGAACCTATAATCTCAGCCACAGATAAGAAAGTGGGAATCAAGAAGTACCTGGTGTTCTACCTTGGGGAAGGTCCACGTGGCACTGAAACCAGATGGGTCATGCAAGAATATCATATTTGCCCATATGTGTTTAAGACACAATCCTATGATCTAAGTGGGAGCAAATGGGTCTTATGCAAAGTCTATGAAAGGAAGAAGTTTCAATTTCAAAAAGGTGCAAACTACTGCTATAGTGATGAGGATGACAGTGGAACAGAACTTTCATGGCAGGATGAAGTTTTTCTGTCTTTAGATGACGATCTTGAAGAAATTAAAAGCATTCCGTAA 618 0.3722 TKKEYQIIIYKMASGIINLPPGFCFSPTDEQLVLNFLYSKDSLPCYSNIIPDLHMSLSDPWELNGKALRSGDEYYFFTKVKENKTTENGYWNEIGVNEPIISATDKKVGIKKYLVFYLGEGPRGTETRWVMQEYHICPYVFKTQSYDLSGSKWVLCKVYERKKFQFQKGANYCYSDEDDSGTELSWQDEVFLSLDDDLEEIKSIP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0948 205 Pfam No apical meristem (NAM) protein 20 136 IPR003441 GO:0003677|GO:0006355
Lal19g0948 205 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 15 201 - -
Lal19g0948 205 SUPERFAMILY NAC domain 10 160 IPR036093 GO:0003677|GO:0006355
Lal19g0948 205 Gene3D NAC domain 28 165 IPR036093 GO:0003677|GO:0006355
Lal19g0948 205 PANTHER NAC TRANSCRIPTION FACTOR 56 15 201 - -
Lal19g0948 205 ProSiteProfiles NAC domain profile. 19 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0948 Lal-Chr19 13478117 13480237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0948 12 165 NAC Transcription Factor Family AT1G61110 37.572 4.32e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal19g0948 NAM 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0948 - - gmx:100779578 285.804