Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0939 ATGGCTTCAAGTTCACAGAGCAAACAAAAGGCTTCTGATTCATCATGGACACCAAAACAAAACAAGATGTTTGAAAGAGTACTTGCAAAATATGATAAGGATACCCCTGACCGCTGGCATAATGTAGCAAAAGCAGTTGGTGGAAAATTACCTGATGAAGTTAAGAAACACTATCAAATCCTTTTAGAGGATCTTAGACACATAGAGTCTGGCCGTGTTCCGATTCCCAACTACAAATCATCACTTATCACCACCAATGTTGATGAAGAAGAGAGGTAA 279 0.3907 MASSSQSKQKASDSSWTPKQNKMFERVLAKYDKDTPDRWHNVAKAVGGKLPDEVKKHYQILLEDLRHIESGRVPIPNYKSSLITTNVDEEER 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0939 92 CDD SANT 15 62 IPR001005 -
Lal19g0939 92 Gene3D - 6 75 - -
Lal19g0939 92 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lal19g0939 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Lal19g0939 92 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Lal19g0939 92 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lal19g0939 92 SMART sant 12 64 IPR001005 -
Lal19g0939 92 Pfam Myb-like DNA-binding domain 14 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0939 Lal-Chr19 13399239 13399517 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal19g0939 Myb_DNA-binding 7.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0939 - - gmx:100798314 155.221