Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal19g0919 | ATGGCGGCGTTTCTGAACAAAACCTACGCCATGGTTGACGACTCCGCCACCGAATCGGTGGTGTCTTGGGGCGATAAAAACACCACCTTCGTCGTTTGGAATGTCCACGTTTTCTCCACTCATATCTTGCCCAAATATTTCAAACACAACAACTTCTCTAGCTTCATCAGACAATTAAATACATATGGTTACATCAATTTGTTTTTGTTTATGGTCCTGGTCCCGGTTACCCTAATCAACGGTGATTGGGTTGTGGTCCGTTTTACTATGTTTGGGTTATATGGGTTTGCATACTCATCCAGTGTTAAGGGCACTGCCGTGCTGGGTTTTAGAAAGGTTGACCCAGACCGCTGGGAATTTGCACATGAAGGGTTCTTAAGGGGTCAAAAACAACTTTTGAAAAGTATCAGTAGACAGAAATCTGCTCATGTAAATGGTTGCAATAAAGAAACATGTCAGGTGCAGAACTCACCTGTTGGGAAATGCATAGAAATGGGCAAGTTTGGGCTGGAGGAACAGGTAGAAAGACTGAAGAGGGATAAAAATGTTATCATGCAGGAAATTGTTAGGTTGAGACAGCAACAACAAACAACTGATAACCAATTACAAACTGTTGGGCAACATATGCAAATAATGGAGCAGCGTCAGCAACAGATGATGTCATTCCTGGCGAAGGCCATGCACAGTCCTGGTTTCTTGTCTCAGTTTGTAGAGCATCAGAATGAAAGTAATAGACAAATTACTGAAATTAATAGAAAGAGGAGGTCCCACATGCAGGAAGAAGATAGTGTAGCCACCAAGAATGTTCATATTGCTCTTGATGAACGTGTTGCCAAGTACCAGCCTTTTATAGATGAGGCAGCGAAAGCATTATTTTTGCAGATATCGCAAATGAACAATTCTACAAAGATGGAATCATCAATTAAGAATCCTGATGCTTTCATTGTTAATGATGTTCCTTCGGCCATTGCATTAAACAACTGTAGTTCATCTACTCAGGTTTCTGGTTTAACCCTTTCTGAGGTTCTTCCTACTTCAGTGCAATCATATACGGCAGTGGAGTCACAACTTCCTGTCAATTGTATGTCCAAGAGCAGAACTGAGGTACAATCTTCACCTGCTGTGTTGACCGATTGTGTCAGAGCATCTGAAATTCCCGAATTAACTGCGCATAACTGCCAAGACAATGTTTTGGATTTTGGTGAAGTTCAGGGGATGGGGACAGAAGGCAGCTTAATCGATTCTGGTCTGAATTTTGCGGGGCTTGACATTGGGAACGTTGAGGAGATAAATATGATGCCAACTGTTTTATATGAAACACTGTCTGTAGAAGCTGATGCTTTTTTGCCTGATGCAGATGGGATTTCTATGCTTCCAGGAATCAATGAATTCTGGTCATGCCCTCCTACTGGAGATACAGATGAAGTTACACGTAGCTCTCTAGAATATGGTTTGATGGGAGACCTTGAGTTATCATCAGAAAAGGAGATTCGACCGGAAAAGATGGATTAG | 1512 | 0.42 | MAAFLNKTYAMVDDSATESVVSWGDKNTTFVVWNVHVFSTHILPKYFKHNNFSSFIRQLNTYGYINLFLFMVLVPVTLINGDWVVVRFTMFGLYGFAYSSSVKGTAVLGFRKVDPDRWEFAHEGFLRGQKQLLKSISRQKSAHVNGCNKETCQVQNSPVGKCIEMGKFGLEEQVERLKRDKNVIMQEIVRLRQQQQTTDNQLQTVGQHMQIMEQRQQQMMSFLAKAMHSPGFLSQFVEHQNESNRQITEINRKRRSHMQEEDSVATKNVHIALDERVAKYQPFIDEAAKALFLQISQMNNSTKMESSIKNPDAFIVNDVPSAIALNNCSSSTQVSGLTLSEVLPTSVQSYTAVESQLPVNCMSKSRTEVQSSPAVLTDCVRASEIPELTAHNCQDNVLDFGEVQGMGTEGSLIDSGLNFAGLDIGNVEEINMMPTVLYETLSVEADAFLPDADGISMLPGINEFWSCPPTGDTDEVTRSSLEYGLMGDLELSSEKEIRPEKMD | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal19g0919 | 503 | Coils | Coil | 167 | 194 | - | - | |
Lal19g0919 | 503 | PANTHER | HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE | 3 | 64 | - | - | |
Lal19g0919 | 503 | PANTHER | HEAT STRESS TRANSCRIPTION FACTOR A-1E-LIKE | 98 | 490 | - | - | |
Lal19g0919 | 503 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 98 | 490 | IPR027725 | - | |
Lal19g0919 | 503 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 3 | 64 | IPR027725 | - | |
Lal19g0919 | 503 | Gene3D | - | 1 | 140 | IPR036388 | - | |
Lal19g0919 | 503 | SUPERFAMILY | "Winged helix" DNA-binding domain | 3 | 138 | IPR036390 | - | |
Lal19g0919 | 503 | SMART | hsfneu3 | 1 | 139 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Lal19g0919 | 503 | Pfam | HSF-type DNA-binding | 4 | 139 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Lal19g0919 | 503 | PRINTS | Heat shock factor (HSF) domain signature | 4 | 27 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Lal19g0919 | 503 | PRINTS | Heat shock factor (HSF) domain signature | 42 | 54 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Lal19g0919 | 503 | PRINTS | Heat shock factor (HSF) domain signature | 55 | 67 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal19g0919 | Lal-Chr19 | 13205236 | 13208555 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal19g0919 | 1 | 482 | HSF | AT5G16820 | 40.637 | 3.80e-108 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Lal19g0919 | HSF_DNA-bind | 1e-27 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal19g0919 | K09419 | - | gmx:100793665 | 454.136 |