Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0916 ATGGAGCAGGTTGATCAGATTCCTACACAAATGAGTTTCCTTCTTCCTTTCCCACCAAACCTTACCTCTTATCCTTTGTTTTCTCCTCAATATTCTAAATCCTTCACTTCAATAACTCCTTCATCACTTGCATCTAATGAAGTATGTGATGGCTCTACATCAAATCTAGCACAAACCCTACTCCAAATCACTGCTCAAAAGTCAAAACATGGCCTCACTTCCACCTTTGGAGAACCTCAATTCCTTTCCTTGCACAGATCTAACGTAAATCCATGGTCATTGGGAGATTGCTTGAGAAGTAAAAGAAGCAGAGAAGAAAATGATGATATGGGGTTTTTTGACATAAAAATGAAGATGAAGAAAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACAATGAGTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAACATCCAAGAAGTTACTACCGTTGCACACAAGAGAATTGTCGCGTAAAGAAACGTGTGGAGCGATTAGCAGAAGATCCAAGAATGGTGATAACAACATATGAAGGGAGACATATACATTCTCCACCAGATCTGAATCTTGAAGATTCTCATGCTCATTCTCAACTTACCAATTTCTTATGGTAG 669 0.3991 MEQVDQIPTQMSFLLPFPPNLTSYPLFSPQYSKSFTSITPSSLASNEVCDGSTSNLAQTLLQITAQKSKHGLTSTFGEPQFLSLHRSNVNPWSLGDCLRSKRSREENDDMGFFDIKMKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHIHSPPDLNLEDSHAHSQLTNFLW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0916 222 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g0916 222 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g0916 222 Gene3D WRKY domain 129 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g0916 222 SUPERFAMILY WRKY DNA-binding domain 136 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g0916 222 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g0916 222 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 37 211 - -
Lal19g0916 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 211 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0916 Lal-Chr19 13194509 13198314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0916 117 222 WRKY Transcription Factor Family AT4G39410 78.182 2.11e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal19g0916 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0916 - - pvu:PHAVU_002G266400g 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0916 19 13194509 13198314 Lal19g0916 19 13194509 13198314 ECH