Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0885 ATGACTCAGCAGAATGTAGTAGTGTGGGATACAAAATCAGGAATCAACAGAACCGTTACGGTTGCGCAAAAACCGCCAACGGTGCCAGGAGGGTACATTTCTTATCCAAGGAGTAGAAGGGTTTTGAAGAACCTTGAAAACATTGGAGAACAAAGAATCAATGCATGGGTTGATTCCATGAGAGCTTCTTCTCCAACTCATGCTAAATCTAATCCTTCTCTGGCTGAAGAACAATACACATCTTGGATTCTTCGTCACCCTTCAGCATTAGACATGTTCGAACAAATTGTGGATGCTTCTAAGGGAAAGCAAATTGTTATGTTCCTGGATTATGATGGTACCCTCTCGCCTATAGTTGATGATCCTGAACGTGCTTTCATGTCCGATTCGATGAGAAAAACAGTGAGGAAACTTGCAAGGTGTTTTCCCACTGCTATAGTTACAGGTAGATGCAGAGACAAGGTATACAATTTTGTTCGGTTGGCAGAGCTATACTATGCTGGAAGCCATGGTATGGATATTAAAGGTCCATCAAAAAGCTCAAAGTTCTTCAAAGGTAAAAAAGCAGAGGAAGTTCTTTTCCAACCTGCTAGTGAATTTCTTCCCATGATAGATGAGGTGTACCAACAATTGGTTGAGAAAACTAAGTCAACTCCTGGAGCCAGTGTTGAGAATAACAAATTTTGTGTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGGGTGAACTGGCACAGCAAGTGAAATCAGTGTTAAAGGAGTACCCAAAGCTTCGTCTCACCCAAGGAAGAAAGGTATTGGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAGGCCTTGGAATTTTTGTTAGCTTCACTTGGATTTGCCAACTGTACCGATGTCTTTCCTGTTTATATTGGTGATGATAAAACCGATGAAGATGCATTCGAGAAACTTAGAGACAGAGGACAAGGTTTTGGGATTCTTGTTTCCAAATTTCCAAAGGACACTAGTGCTTCTTACTCTTTACAAGAACCAAATGAGGCAAGTGATGGACTTCCTTCAGCGTTTGGTGGAGTGGAAACAAGTGAAAGCACGTTCCAAGGTGTAATTATGGATATATGA 1113 0.4106 MTQQNVVVWDTKSGINRTVTVAQKPPTVPGGYISYPRSRRVLKNLENIGEQRINAWVDSMRASSPTHAKSNPSLAEEQYTSWILRHPSALDMFEQIVDASKGKQIVMFLDYDGTLSPIVDDPERAFMSDSMRKTVRKLARCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPSKSSKFFKGKKAEEVLFQPASEFLPMIDEVYQQLVEKTKSTPGASVENNKFCVSVHFRCVDEKKWGELAQQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLASLGFANCTDVFPVYIGDDKTDEDAFEKLRDRGQGFGILVSKFPKDTSASYSLQEPNEASDGLPSAFGGVETSESTFQGVIMDI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0885 370 Gene3D - 197 273 - -
Lal19g0885 370 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 107 318 IPR006379 -
Lal19g0885 370 Pfam Trehalose-phosphatase 108 342 IPR003337 GO:0003824|GO:0005992
Lal19g0885 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 345 - -
Lal19g0885 370 TIGRFAM T6PP: trehalose-phosphatase 103 344 IPR003337 GO:0003824|GO:0005992
Lal19g0885 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 345 IPR044651 GO:0004805|GO:0005992
Lal19g0885 370 Gene3D - 107 339 IPR023214 -
Lal19g0885 370 CDD HAD_TPP 106 342 - -
Lal19g0885 370 SUPERFAMILY HAD-like 106 346 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0885 Lal-Chr19 12882933 12886286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0885 96 359 Trehalose Biosynthesis Gene Families AT1G06410 25.614 2.65e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0885 K01087 - gmx:100794430 582.793