LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal19g0868	ATGAGCGTGGACATTGTTGTGTCAGTGGTTGATACCAGTAAAAATGAACTTAATATTTGTGCTTTTGCTATTGGGTTGCTTATGTTCTTTTGTGTTTCCCGATCCACAAGGTTTGTAATGTTCTTGGTCATTACAGGAGATGCACTGTATTCATTGAGGAGTTCATTGAAAGCTTCGGCGGACCAACTTACTGACTGGAACCAAAATCAAGTGAACCCTTGTACTTGGTCACGTGTTTATTGTGACCCAAACTACAATGTGGAACAAGTCTCACTAGCATTTATGGGATTCACAGGAACCTTGACCCCAAGAATAGGAGTTCTAAAATATCTTAAAACTCTTTCTTTGCAAGGGAATGGCATCACTGGTGGCATACCAAAAGAATTAGGAAACCTAACAAACTTGCACAGGTTGGATTTGGAAAATAACAGATTAACGGGTGAAATACCATCATCTCTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTGAGTCAAAACAATCTTACTGGGACTATTCCGGAATCACTGGCCAGTCTTCCAAGCTTGATCAATGTTCTGCTAGATTCAAATGATCTCAGTGGTCAGATTCCAGACCAACTTTTCGAAGTTTCTAAATACAACTCTGAAATGGTTTTCTTTTCTAACATGAAGGTTGTCCGGGATGACAAAGTTTATCTGGTGAAGAACTACAGTTTCACTGGAAATAAGTTGAATTGTGGTGGGAATCAGCGTCACCCTTGCGCATTTGACAGTGCAGATCAAGGTTCATCACATAAACCAAAAACTGGCCTCATAATTGGAGTTATTGTGGGGTTAGTCGTTATTCTTTTCCTTTGTTGTCTGCTGTTCTTTTGGTGCAAGGGTAGCCACAAGGGCTACAAACCTGAAGTTTATGTAGATGTTGCAGCATTTGAAAATATTGATCTGGAAACTGCACCTGTGCATTTGGTTTCAATACTTGTTATTGCTCACCTCATTATGTATAGTCAATGCACTGGAATTGCACTGTTTCTTGCTGACCAAATCCTCAAATCCACCATGATGATCAACAGATTCTGGCTAATTACTGCAGTGTTCATTTTATTAATTAGTCTAGTTCCTTTACCATCTTGCTCTTTTGTATGCCAATGCTCTTTGGTCGCGCTTCACCTTCTTTTTCGTTTTCCCACCCTCTGTGGTCCACTTGATCAAACTAGGTGGAATTTGGGCAATGCGTTTAATTGTGAAGTTGATCGACGAATTGCATTTGGTCAACTAAAAAGATTTGCATGGAGAGAACTACAGATAGCTACGGACAACTTCAGTGAGAAAAATGTTTTAGGCCAGGGAGGCTTTGGAAAGGTTTACAAAGGTGTTCTTGCTGATAATACAAAAGTTGCTGTCAAAAGGTTGACTGATTATGAAAGTCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTCCATAGGAACCTGTTAAGGCTGATTGGGTTTTGTACTACACCAACTGAGCGCCTCTTAGTTTATCCCTTCATGCAAAACTTAAGTGTTGCCTATCGTCTACGAGAAATCAAACCTGGGGAACCTGTTTTGGATTGGCCTACAAGAAAACGAGTGGCTCTGGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCATTGTAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTCTTACTTGATGAGGATTTTGAGGCAGTTGTTGGAGACTTTGGTTTGGCAAAGTTAGTCGATGTTCGAAAGACTAATGTGACAACTCAAGTTCGTGGGACAATGGGCCACATAGCTCCTGAATATTTGTCCACCGGAAAGTCATCAGAAAGGACTGATGTTTTTGGTTATGGGATTATGCTTTTGGAGATTGTTACTGGTCAACGGGCAATTGACTTCTCACGTTTGGAAGAGGAAGATGATGTGCTATTGCTTGACCATGTTAAGAAACTGGAACGGGAGAAAAAACTGGATGCTATTGTTGACGGAAACTTAATAAAAAACTACAATATGCAAGAGGCAGAGATGATGATACAAGTTGCATTGCTCTGCACACAAGGAACACCAGAGGACCGTCCACTTATGTCCGAGGTTGTAAGAATGCTAGAAGGGGAAGGGTTAGCAGAAAGGTGGGAGGAATGGCAGCATGTAGAGGTTAATCGGAGGCAAGAATACGAGAGACTGCAAAGAAGATTTGACTGGGGAGAAGATTCGGTTTATAACCAAGATGCCATTGAGTTGTCTGGTGGGAGATGA	2277	0.4128	MSVDIVVSVVDTSKNELNICAFAIGLLMFFCVSRSTRFVMFLVITGDALYSLRSSLKASADQLTDWNQNQVNPCTWSRVYCDPNYNVEQVSLAFMGFTGTLTPRIGVLKYLKTLSLQGNGITGGIPKELGNLTNLHRLDLENNRLTGEIPSSLGNLKKLQFLTLSQNNLTGTIPESLASLPSLINVLLDSNDLSGQIPDQLFEVSKYNSEMVFFSNMKVVRDDKVYLVKNYSFTGNKLNCGGNQRHPCAFDSADQGSSHKPKTGLIIGVIVGLVVILFLCCLLFFWCKGSHKGYKPEVYVDVAAFENIDLETAPVHLVSILVIAHLIMYSQCTGIALFLADQILKSTMMINRFWLITAVFILLISLVPLPSCSFVCQCSLVALHLLFRFPTLCGPLDQTRWNLGNAFNCEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEIVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKKLDAIVDGNLIKNYNMQEAEMMIQVALLCTQGTPEDRPLMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYERLQRRFDWGEDSVYNQDAIELSGGR	758

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal19g0868	758	SUPERFAMILY	L domain-like	47	207	-	-
	Lal19g0868	758	Gene3D	Transferase(Phosphotransferase) domain 1	512	729	-	-
	Lal19g0868	758	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	26	208	-	-
	Lal19g0868	758	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	408	758	-	-
	Lal19g0868	758	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	223	304	-	-
	Lal19g0868	758	ProSitePatterns	Protein kinases ATP-binding region signature.	441	463	IPR017441	GO:0005524
	Lal19g0868	758	Gene3D	Ribonuclease Inhibitor	45	250	IPR032675	-
	Lal19g0868	758	Pfam	Leucine rich repeat N-terminal domain	46	82	IPR013210	-
	Lal19g0868	758	Pfam	Protein kinase domain	436	707	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal19g0868	758	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	558	570	IPR008271	GO:0004672\|GO:0006468
	Lal19g0868	758	ProSiteProfiles	Protein kinase domain profile.	435	714	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal19g0868	758	Pfam	Leucine rich repeat	133	193	IPR001611	GO:0005515
	Lal19g0868	758	Gene3D	Phosphorylase Kinase; domain 1	406	511	-	-
	Lal19g0868	758	SMART	serkin_6	435	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal19g0868	758	SUPERFAMILY	Protein kinase-like (PK-like)	417	710	IPR011009	-
	Lal19g0868	758	PANTHER	LRR RECEPTOR-LIKE KINASE	26	208	-	-
	Lal19g0868	758	PANTHER	LRR RECEPTOR-LIKE KINASE	408	758	-	-
	Lal19g0868	758	PANTHER	LRR RECEPTOR-LIKE KINASE	223	304	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal19g0868	Lal-Chr19	12791895	12799786	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal19g0868	410	758	Receptor kinase-like Gene Family	AT5G10290	90.831	0.0	660

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Lal19g0868		Pkinase	5.8e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal19g0868	-		-	gmx:100793416	668.307