Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0857 ATGTCGAAACCTTGGGGTAGCATCGGAGCCTGGGCCGCAGATTCGGAGCGTGCCGAAGCTGAAGAGCGTGAAGCCGAAGCTGTTTCCCAAACCGCTTCATCACAGAACTTCCCGAGCCTCAAGGAAGCTGTGAATGTCAAACAACCCAAAAAGAAGAAGATGTCGCTATCTGAGTTATCCAAAATCGCTTCCGGTGGAGGCTCTGGTGGTTCTGCGTCGTCGGAGTACCGTGGCTTGACGCCGGACGAGATACTCCGCCTCCCCACCGGCCCTAAGGAGCGTTCTGCCGAGGAAATGCAGTTCAGCCGCGGCGGATTCTCCTCCTACGGCCGCTCCGGTGGACCTACGAGAGACCGAGATGACAACCGTGATGGTTCTTGGGGTGGAGGGAGAAGATCCTATGGTGGATTCGATGAAGAACCACGCAGGGGGAACAATTCTAGGGTTTCGGAATTGGATCAGCCTTCGAGAGCTGACGGGGTTGATAACTGGGCTTCGGTGAAGAAATCTCTGCCGTCGTTCGATTCCGGACGGCAAAATCGATATGATTCTCTCGGCAGCGGTGGTGAAGAACGGGATGGCGGTTTCGGTGGTGGTTCCAGGGCTGATGGTGTGGATAACTGGGGGGTTGGGAAGAAACCTTTGCCTGTCAGATCTTCGAACTTTGGACCTTCCAACTTTGGTTCCGGTTATCGTGATTCAGGCCTGGAGCCAGATCGCTGGACCAGGGGTTCTCCGCTGCCACAGCGTGAGGAGCGAGAGCGGCCGAGGTTGGTATTGGATCCACGGAAAAGCGGCGATGGTTCTGTGAATGAAGCTCCGGCAAAGACAAATAAGTCAAATCCATTTGGTGCGGCAAGGCCGAGGGAGGATGTTTTGGCAGAGAAGGGATTGGATTGGAAGAAGCTTGATTCGGAGCTTGAGGCAAAGAAGCCGACGAGTCGCCCCACGAGCTCACACTCCAGCAGGCCTTCTAGTGCTCAATCTGGTCGCTCTGAGGGTCCAGGGCTGCAGGGTGCTGAAACTGTGGTGAAACCCAGACCCAAGGTTAATCCCTTTGGAGATGCCAAACCTAGGGAGGTTTTGCTGGTGGAGCGAGGTATGGATTGGAGGAAGATTGATCTTAAATTGGAGCATCGCCGTGTTGAGAGTATGGCAAGGGACATGGATAGTTGGATGCAAGAAAAGGAAGAACTAAAGCGTGATGGACAGGGCAGATTGGAAGTCTTTGTCAAATGGCGGTATCTCCCTCAACATGATTCCACATGGGAACTAACCACTACATTGAAAGACAACTTTCCTAGTTTCCAACTTGAGGACAAGTTAGAGAGTTTAGGGGGGAGTATTGATAAGGTGGCACTTTTGAGCTCTGTTTTCGGCTTTGTTTTCCCCTGTTCAGACTTCCTTGTTTTCTCTTCATCAGTTATGCCTCAATATGTCACTCTGCTGTTTTTTTTCTTCAAGGATTGTGGATTTGAGATTTTTGTCACAAGTAGGGTTCTGTCTGTATTATGGAGTGGTATGAGACTGACCCTGTGTTTGGAGATTAAATTTGAGTTTTTGACAAGGCCTGAGACTGAAGAGGAAAAGTTATTAAAAGAAGAAATTGATCATTTGAAGAAGGAACTTGAGAAAGAGTCTACCATAAATTCAAATAAGGAATCTGTGGGTGAGGCTGGTGAAGACCAAACTAGTGCACATGCAATGTTACAACAGAAAGAAAGGGAGCTGGAACTTCTTATCCATGATCTGGATGACAAAGTTCGTTTTGGTCAGAAAGCTGTTGAAAGGCCAGGTTCCTCAGCAGGAAGGAGTACTGGTTTTCCTGATAGGCCAGATTCCCGATCTGGCTCATTCGAAGATTCTAGAAGTGTGGAGTTTAATGACAGACCTCGATCCCGTGGCACAGGAGACAGGTTAACGCATCCTAGTGATGAAAGAAGATCATATCAAGGTAGCAGGGGCAGGGGAGGGTTTTTAGGTAGCAGAGATGTGAATAGTGGCTTTGAATTCAATTCTGTTTATTCTGCCCTTCTATTAGTCAGGGTCAAGAGAGAGATGGTGAATACTGAACATTTTGTGTGGATTAAGAGTTATCTTCAACTTTTGATGACCAGAACCTGGTATTATTTTGTCCCGACATTCGTCTTTTCTAATCGTTTTGTTCAATTTTACTCCTGGAATTGGAGAAACAATCATTGGCACTAA 2208 0.4846 MSKPWGSIGAWAADSERAEAEEREAEAVSQTASSQNFPSLKEAVNVKQPKKKKMSLSELSKIASGGGSGGSASSEYRGLTPDEILRLPTGPKERSAEEMQFSRGGFSSYGRSGGPTRDRDDNRDGSWGGGRRSYGGFDEEPRRGNNSRVSELDQPSRADGVDNWASVKKSLPSFDSGRQNRYDSLGSGGEERDGGFGGGSRADGVDNWGVGKKPLPVRSSNFGPSNFGSGYRDSGLEPDRWTRGSPLPQREERERPRLVLDPRKSGDGSVNEAPAKTNKSNPFGAARPREDVLAEKGLDWKKLDSELEAKKPTSRPTSSHSSRPSSAQSGRSEGPGLQGAETVVKPRPKVNPFGDAKPREVLLVERGMDWRKIDLKLEHRRVESMARDMDSWMQEKEELKRDGQGRLEVFVKWRYLPQHDSTWELTTTLKDNFPSFQLEDKLESLGGSIDKVALLSSVFGFVFPCSDFLVFSSSVMPQYVTLLFFFFKDCGFEIFVTSRVLSVLWSGMRLTLCLEIKFEFLTRPETEEEKLLKEEIDHLKKELEKESTINSNKESVGEAGEDQTSAHAMLQQKERELELLIHDLDDKVRFGQKAVERPGSSAGRSTGFPDRPDSRSGSFEDSRSVEFNDRPRSRGTGDRLTHPSDERRSYQGSRGRGGFLGSRDVNSGFEFNSVYSALLLVRVKREMVNTEHFVWIKSYLQLLMTRTWYYFVPTFVFSNRFVQFYSWNWRNNHWH 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0857 735 MobiDBLite consensus disorder prediction 169 183 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 61 75 - -
Lal19g0857 735 Coils Coil 382 402 - -
Lal19g0857 735 Pfam Plant specific eukaryotic initiation factor 4B 1 404 IPR010433 GO:0003743
Lal19g0857 735 Pfam Plant specific eukaryotic initiation factor 4B 514 657 IPR010433 GO:0003743
Lal19g0857 735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 517 668 IPR010433 GO:0003743
Lal19g0857 735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 401 IPR010433 GO:0003743
Lal19g0857 735 MobiDBLite consensus disorder prediction 1 353 - -
Lal19g0857 735 Coils Coil 529 549 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 314 335 - -
Lal19g0857 735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 401 - -
Lal19g0857 735 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 517 668 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 543 568 - -
Lal19g0857 735 SUPERFAMILY Chromo domain-like 345 432 IPR016197 -
Lal19g0857 735 MobiDBLite consensus disorder prediction 27 42 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 236 262 - -
Lal19g0857 735 Gene3D - 392 439 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 594 659 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 614 652 - -
Lal19g0857 735 MobiDBLite consensus disorder prediction 289 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0857 Lal-Chr19 12638174 12645137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0857 512 659 Eukaryotic Initiation Factors Gene Family AT3G26400 49.007 2.03e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0857 - - gmx:100784238 417.542