Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0819 ATGGATGGTAATGGTGACATTTCTCATAAGTCTCAAAAGAAGGAGTATGATAATAAGGATTCAGTTTTCATACATGGTGATTTGGATCTGATTATAATAGAAGCAAAATCTCTTCCAAATTTGGATTTATCTTCTGAGACATTTAGAAAATGCATCACTATGGGAAACATTTGCACCCCTCCTTTTGTAAAAGGACTTAAGACCCATTCAGGGAATCATAAAATGATAACAAGTGACCCTTATGTCTCTATTTGCCTAGGAGGTGCAACAATAGCTCAAACAAGAGTCATTCCTAATTGTGAAAATCCAATGTGGGATGAACATTTTCTTGTACCAGTTGCACACCCTGCTACAAAATTGGAGTTCCTTGTCAAAGATGATGATGTTCTTGGTGCCGAACTAATCGGAGTAGTCGATATACCTGCTCAAAAGATTTTGTCAAGGAACCTTATCAATGATTGGTTTCCGATTATCGGCCAATACGGAAACTGCTTAAAACCTTACCCCGAGTTACATATTTCGGTTCAGTTTAGGCCTATTGGAGTTAACAACAACCTTTCAGAAAATGGAGGGGATGTAACAGCTCCTTTAGGGGTTCCTAGAACATATTTCCCTCTCAGGAAAGGAGGGAATGTGACCCTATATCAAGATGCACATGTCCCTGATGGTATGCTACCTGAAATTCCACTAGAGGGTGGAAAAGTGTTTCATCAAGGTAAATGTTGGGAAGATATTTGCCATGCAATTTTGGAAGCTCATCACTTAATATATGTTATAGGATGGTCAATTTATCACCCTGTTAAGCTTGTTAGAGAGCCAACAAAACCATTGCCTTCTGGTGGAGAGCTTACACTTGGAGAGCTTTTGAAGTATAAGTCACAAGAAGGGGTCAGAGTGGTTATGCTTATTTGGGATGACAGAACTTCACATGACAAATTTCTTATTAAAACAGATGGTGTCATGCAGACCCATGATGAACAAACTAAGAAGTATTTCAAGCACTCAACTGTTCATTGTGTTGTAGGAACCCTCTTTACACATCACCAGAAATGTGTGATTTTGGACACTCAAGCATCTGGAAATAACAGGAAAATAACTGCTTTTATTGGTGGTCTGGATCTATGTGATGGAAGATATGATACACCACAACACCGGCTTTTTGTCGATCTAGATACTGTCTTTCACAATGATTATCATAATCCTACATTTCAAATAAGTTCATATGGACCAAGGCAACCATGGCATGATTTACACTGCAAAGTTGAAGGTCCAGCTGCATATGATATATTGACCAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGCGACTTTAGGCTAAAAAAGGTGACAAATTGGCATGACGATGCTTTGTTAAGACTCGACCGTATTTCATGGATTCTCAGTCCATCTAGTGGTCCTAATGGTGATAAATCTGTTCATGTAACTGATGAAAATGATCCTGAGAATTGGCATGTACAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGTTTCCCAAAGGATTTTGACAAAGCTAAGGCTGAGAACCTTTTATGTGGAAAAAATTTGAAAGTAGATCAAAGCATTCATGCTGCTTATGTAAAGGCAATAAGATCAGCTCAACACTTCATATATATAGAGAATCAATATTTTCTTGGTTCATCATATCATTGGCCTTCATATAAAAATGCAGGTGCAAATCACTTGGTTCCAATGGAGTTGGCATTGAAAATCACTAGCAAGATCACGGCGAAAGAGCGTTTTTGTGTGTATATAGTTATACCAATGTGGCCAGAGGGGGTTCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAAACAATGTCTATGATGTACAGAATTATTGCAGATACACTCTTCAAAGAAGGTCTCTCGAATAAGTATCATCCGCGAGATTATCTCAATTTTTACTGCCTTGGAAGGAGAGAACAAGGACCCTCAGAAAATTCGTCATCGCCGAAATCGAATCAGTCATCTGAACACCGCGCTTTGGCATCAGTAAGAAAATTCAGACGTTTTATGATTTATGTTCATGCTAAGGGAATGATAGTTGATGATGAATATGTGATAATGGGATCTGCTAATATAAACCAAAGATCAATGGATGGTTCTAGAGACACAGAAATAGCTATGGGTGCTTATCAGCCAAAATATACATGGACTGAAAAGAATTCTCATCCATGTGGCCAGGTATATGGATATAGAATGTCTCTATGGGCTGAACACTTAGGTAGAGTTGATGACATTTTTTGTGAACCTCAAAGCTTGGAATGTGTTAGACATGTTAACAACATTGCCAAAAGAAACTGGACAACATTTGTGTCTGATGAAGGGAATCAAATGAGAGGACACTTGATGCAGTATCCAGTTCATGTAAGTAGAGATGGAAAAGTTAGTGCACTAAATGATCATGAGTTTTTTCCTGATGTTGGTGGTAAAATTCTTGGATCACCTAATTCTCTTCCTGATGCACTAACAACATGA 2523 0.3849 MDGNGDISHKSQKKEYDNKDSVFIHGDLDLIIIEAKSLPNLDLSSETFRKCITMGNICTPPFVKGLKTHSGNHKMITSDPYVSICLGGATIAQTRVIPNCENPMWDEHFLVPVAHPATKLEFLVKDDDVLGAELIGVVDIPAQKILSRNLINDWFPIIGQYGNCLKPYPELHISVQFRPIGVNNNLSENGGDVTAPLGVPRTYFPLRKGGNVTLYQDAHVPDGMLPEIPLEGGKVFHQGKCWEDICHAILEAHHLIYVIGWSIYHPVKLVREPTKPLPSGGELTLGELLKYKSQEGVRVVMLIWDDRTSHDKFLIKTDGVMQTHDEQTKKYFKHSTVHCVVGTLFTHHQKCVILDTQASGNNRKITAFIGGLDLCDGRYDTPQHRLFVDLDTVFHNDYHNPTFQISSYGPRQPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWILSPSSGPNGDKSVHVTDENDPENWHVQVFRSIDSGSVKGFPKDFDKAKAENLLCGKNLKVDQSIHAAYVKAIRSAQHFIYIENQYFLGSSYHWPSYKNAGANHLVPMELALKITSKITAKERFCVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYRIIADTLFKEGLSNKYHPRDYLNFYCLGRREQGPSENSSSPKSNQSSEHRALASVRKFRRFMIYVHAKGMIVDDEYVIMGSANINQRSMDGSRDTEIAMGAYQPKYTWTEKNSHPCGQVYGYRMSLWAEHLGRVDDIFCEPQSLECVRHVNNIAKRNWTTFVSDEGNQMRGHLMQYPVHVSRDGKVSALNDHEFFPDVGGKILGSPNSLPDALTT 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0819 840 ProSiteProfiles C2 domain profile. 6 155 IPR000008 -
Lal19g0819 840 Gene3D C2 domain 8 180 IPR035892 -
Lal19g0819 840 PANTHER PHOSPHOLIPASE D 19 840 - -
Lal19g0819 840 PANTHER PHOSPHOLIPASE D 19 840 IPR015679 -
Lal19g0819 840 Pfam C2 domain 26 157 IPR000008 -
Lal19g0819 840 Gene3D Endonuclease Chain A 233 459 - -
Lal19g0819 840 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 686 713 IPR001736 GO:0003824
Lal19g0819 840 SMART pld_4 343 378 IPR001736 GO:0003824
Lal19g0819 840 SMART pld_4 686 713 IPR001736 GO:0003824
Lal19g0819 840 SMART C2_3c 27 154 IPR000008 -
Lal19g0819 840 PIRSF PLD_plant 12 840 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lal19g0819 840 Gene3D Endonuclease Chain A 484 736 - -
Lal19g0819 840 SUPERFAMILY Phospholipase D/nuclease 530 771 - -
Lal19g0819 840 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 24 179 IPR035892 -
Lal19g0819 840 Pfam PLD-like domain 538 722 IPR025202 -
Lal19g0819 840 Pfam Phospholipase D C terminal 760 830 IPR024632 -
Lal19g0819 840 Pfam Phospholipase D Active site motif 344 378 IPR001736 GO:0003824
Lal19g0819 840 SUPERFAMILY Phospholipase D/nuclease 199 446 - -
Lal19g0819 840 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 343 378 IPR001736 GO:0003824
Lal19g0819 840 CDD C2_plant_PLD 22 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0819 Lal-Chr19 12245425 12250782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0819 22 839 Phospholipase D Gene Family (Wang group) AT2G42010 53.596 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0819 K01115 - gmx:100779740 1455.27