Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0818 ATGAGTTTGCAATCAAGCTTCAACAAGAAGATATATAGAGAGAGAAACAAAGAGAGGTTGTTGAAGAAACAAACCCTAGGACCTAGGTGTAGGAAAGAGAGAAACTTTTTCTTCGATTTCAAGCCCCTTTTAACCATTGCATTCAGGGATCTCGAATCTTCAATTTCTAAAGTTATTGGCATGTGGCTCCATAAAGTAGGTTTTGAGAAGACTTTTAGGAGCCTCATTAAAGAAAGTAGTAGATTAGATGGAGGTAGAGGGAGGCCAAAAAAACCTATAGAAGAAACCATTAAGACGGGTATTTATTCTGCTTCTATGGCAAATTCAAAGGGCTCATCAGGTGTCAGAAATTTCATGTATCCTGGAAAACATCCTCTTCTTCCTCCTAAAAGTCCATTTCCAACTGTTTCGCAAGCATATGTTGATTATCTCCCAAATTCTGCAGTTGGTTCAAAGGCTGTTCAGAAACCTAGAGAGGGAAACACACACCACCAACGTACTTCATCTGAGAGCCATGTTATGGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTGCGAAGGGGTGGTCATCGGCGTTCGTCAAGTGATTCTTCTTTTGCATACTTAGATAAATTTAATGCGACCAACATCAATTATGCTGAGCAGAATTTGCTATCCATTCCATCTTGGGCATCTCAAGAATTTGATCAAGGCAAAGATGCGCGTCATATACCCACATATGCAGAAATGAATGCAGCAAAACAGAGAAATAGGTCATGGGACTCATTTTCAAATGCCATGAATCATCCAGGTATTGCTCCCTCTAGCAAAGAAAATGTTGTATTGAAGAGTTCAGGATCACCATATGCACCACATGAAGCAGATATACTTCCCTCAACTGCAAATGAAAAGTATGATTCAGTAGAATCTGGCATACAGGATACAAAACCATCTTCTGAACGAAAGGATGGTTCACATGCAAAGTCATCTGCTTCTGAGACAGATACAAAACGTGCTAAACAGCAATTTGCACAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTGTCAGCTGAACTAGAATTTCTTAACCAGCAAAATCTGATCCTGAGCATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAACAGCTTATCAAATATCTGGAACAGGAAGTACTGGAAAGAGAAATTGGAAGATTGCGAACATTGTTTCAGCAGCAGCAGCATATACATCAGCCACAACAACCATCAACTAGTCATAGGCGCACCAACAGCAGAGACCTCGAATCTCAGTTTGCAAATATTTCTCTAAAACACAAGGACACCAATTCCGGGCATGACCCCACGACCGGAGCACTCAGAATTTAG 1431 0.4116 MSLQSSFNKKIYRERNKERLLKKQTLGPRCRKERNFFFDFKPLLTIAFRDLESSISKVIGMWLHKVGFEKTFRSLIKESSRLDGGRGRPKKPIEETIKTGIYSASMANSKGSSGVRNFMYPGKHPLLPPKSPFPTVSQAYVDYLPNSAVGSKAVQKPREGNTHHQRTSSESHVMEEQPSWLDDLLNEPETPVRRGGHRRSSSDSSFAYLDKFNATNINYAEQNLLSIPSWASQEFDQGKDARHIPTYAEMNAAKQRNRSWDSFSNAMNHPGIAPSSKENVVLKSSGSPYAPHEADILPSTANEKYDSVESGIQDTKPSSERKDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRTLFQQQQHIHQPQQPSTSHRRTNSRDLESQFANISLKHKDTNSGHDPTTGALRI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0818 476 MobiDBLite consensus disorder prediction 151 176 - -
Lal19g0818 476 MobiDBLite consensus disorder prediction 426 442 - -
Lal19g0818 476 MobiDBLite consensus disorder prediction 315 342 - -
Lal19g0818 476 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 106 464 IPR044797 -
Lal19g0818 476 MobiDBLite consensus disorder prediction 157 171 - -
Lal19g0818 476 Coils Coil 348 403 - -
Lal19g0818 476 Gene3D - 337 389 - -
Lal19g0818 476 SUPERFAMILY Leucine zipper domain 344 386 IPR046347 GO:0003700|GO:0006355
Lal19g0818 476 SMART brlzneu 333 392 IPR004827 GO:0003700|GO:0006355
Lal19g0818 476 PANTHER - 106 464 - -
Lal19g0818 476 MobiDBLite consensus disorder prediction 261 283 - -
Lal19g0818 476 CDD bZIP_plant_RF2 335 383 IPR044759 GO:0003700|GO:0006355
Lal19g0818 476 MobiDBLite consensus disorder prediction 426 476 - -
Lal19g0818 476 MobiDBLite consensus disorder prediction 261 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0818 Lal-Chr19 12236640 12241036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0818 127 407 bZIP Transcription Factor Family AT2G42380 29.293 6.40e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0818 - - gmx:100813098 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1259 14 14385006 14390085 Lal19g0818 19 12236640 12241036 LSH
Lal7g0727 7 14191818 14196556 Lal19g0818 19 12236640 12241036 LSH