Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0816 ATGGAAAGCATTGCCGCTCAACTCAACTGCGGCATCTCCCGCCAATTCTCCACAGGTGGCGGCGCATCATCAATGCGCCGCAACCTGGGAAGACAATTAACACGCCAGTCCTCTATGGACCCGAGGCGTAACAACCTCAGGTTCAGTTTTGGAAGGCAATCATCGCTCGATCCGATTCGGCGTAGGAGTCCTACGCCGGATCATATCGAGCTGACGGTGCCTGAGAACCTGGACTTGACAATGCAGCTATTGTTTATGGCTTGTAGGGGGGATATGAAGGGAGTGGAGGATTTGTTGAATGAGGGTATTGATGTAAATAGCATTGATCTTGATGGACGTACTGCTCTTCATGTTGCTGCTTGTGAGGGCTATGTTGAGGTTGTTAGGCTCTTGCTTTCACGTAAGGCTAATATTGATGCTCGTGATCGCTGGGGTAGTACGGCAGCAGCTGATGCCAAACATTATGGAAATTCAGAAATTTATTATATGCTGAAGGCCCGTGGAGCAAAAGTGCCGAAAGTCAATAAGACTCCAATGACTGTTTCAAATCCTCGTGAAGTTCCAGAATATGAACTCAATCCCTTAGAACTCCAGGTCAGGAAGAGTGATGGTATTTCAAAGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAAGTTTCAGTGAAGATACTCGATAAGGACAGTTATTCAGATCTTGATAGCATAGATGCTTTCAAACACGAGCTTACATTATTAGAAAGGGTACGACATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACCCAAAATATACCTATGATGATTGTTGTAGAATACCATGCTAAGGGTGACCTAGCAAGCTATCTTCAAAAGAAAGGCCGTTTGTCCCCATCAAAAGCTCTACGATTTGCTCTTGATATTGCCAGGCAAGTAACTATTTTAGCTACGCTGGGAATGAACTATCTGCATGAATGCAAACCAGATCCAGTTTTCCACTGTGATTTAAGGCCAAAAAATATTTTGCTGGATAATGGAGGGCAACTGAAGATAGCTGGATTTGGCAATGTCAGATTATCACAAATGTCGTCTGATAAAGTAAGGATGGTACAGCCTGAGGCTAATGTTGACCTTTCAAACTTGTACATGGCACCCGAGATCTACAAAGATGAAGAATTTGATAGAACTGTGGATGCTTATTCTTTTGGTCTCATTGTATATGAGATGATTGAAGGTACACAGCCCTTTCAACCCAAGTCCGCCGAGGAGGCTGCGAAACTCTTGTGCTTAGAAGGGAGAAGACCAACATTCAAGATAAAAACAAAACATTATCCTCCCGATTTGAAAGAATTGATTGAGGAATGTTGGGATTCAGAGCCTCTTGTCAGGCCAACATTTTCACAGGTCATTGTACGGTTGGACAGAATTGTTGCGAATTGCGCAAAACAAGGATGGTGGAAAGACGCTTTTAAACTTCCTTGGAAATAA 1467 0.4363 MESIAAQLNCGISRQFSTGGGASSMRRNLGRQLTRQSSMDPRRNNLRFSFGRQSSLDPIRRRSPTPDHIELTVPENLDLTMQLLFMACRGDMKGVEDLLNEGIDVNSIDLDGRTALHVAACEGYVEVVRLLLSRKANIDARDRWGSTAAADAKHYGNSEIYYMLKARGAKVPKVNKTPMTVSNPREVPEYELNPLELQVRKSDGISKGTYQVAKWNGTKVSVKILDKDSYSDLDSIDAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVVEYHAKGDLASYLQKKGRLSPSKALRFALDIARQVTILATLGMNYLHECKPDPVFHCDLRPKNILLDNGGQLKIAGFGNVRLSQMSSDKVRMVQPEANVDLSNLYMAPEIYKDEEFDRTVDAYSFGLIVYEMIEGTQPFQPKSAEEAAKLLCLEGRRPTFKIKTKHYPPDLKELIEECWDSEPLVRPTFSQVIVRLDRIVANCAKQGWWKDAFKLPWK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0816 488 ProSiteProfiles Protein kinase domain profile. 195 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal19g0816 488 SMART ANK_2a 79 107 IPR002110 GO:0005515
Lal19g0816 488 SMART ANK_2a 111 140 IPR002110 GO:0005515
Lal19g0816 488 ProSitePatterns Tyrosine protein kinases specific active-site signature. 324 336 IPR008266 GO:0004672|GO:0006468
Lal19g0816 488 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 36 486 - -
Lal19g0816 488 Pfam Ankyrin repeats (3 copies) 85 170 IPR002110 GO:0005515
Lal19g0816 488 PIRSF ILK 8 487 - -
Lal19g0816 488 PRINTS Tyrosine kinase catalytic domain signature 271 284 IPR001245 GO:0004672|GO:0006468
Lal19g0816 488 PRINTS Tyrosine kinase catalytic domain signature 318 336 IPR001245 GO:0004672|GO:0006468
Lal19g0816 488 PRINTS Tyrosine kinase catalytic domain signature 390 412 IPR001245 GO:0004672|GO:0006468
Lal19g0816 488 PRINTS Tyrosine kinase catalytic domain signature 437 459 IPR001245 GO:0004672|GO:0006468
Lal19g0816 488 SUPERFAMILY Ankyrin repeat 82 180 IPR036770 -
Lal19g0816 488 Pfam Protein tyrosine and serine/threonine kinase 205 465 IPR001245 GO:0004672|GO:0006468
Lal19g0816 488 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 36 486 - -
Lal19g0816 488 Gene3D Phosphorylase Kinase; domain 1 192 274 - -
Lal19g0816 488 SUPERFAMILY Protein kinase-like (PK-like) 208 466 IPR011009 -
Lal19g0816 488 ProSiteProfiles Ankyrin repeat profile. 111 143 IPR002110 GO:0005515
Lal19g0816 488 Gene3D Transferase(Phosphotransferase) domain 1 275 482 - -
Lal19g0816 488 Gene3D - 55 189 IPR036770 -
Lal19g0816 488 ProSiteProfiles Ankyrin repeat region circular profile. 111 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0816 Lal-Chr19 12223572 12230106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0816 1 487 MAP Kinase Kinase Kinase AT2G43850 72.857 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal19g0816 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0816 - - gmx:100810411 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1253 14 14339912 14346071 Lal19g0816 19 12223572 12230106 LSH