Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0798 ATGGCGGTTCCACTACTCACGAAGAAGATCGTTAAGAAGCGCGTCAAGAGGTTCAAGCGTCCCCAGAGCGATCGAAAAATATCCGTCAAGCCAAGCTGGCGTAGACCAAAGGGTATTGATTCACGTGTCAGGAGAAAGTTCAAGGGATGTGTGTTGATGCCAAACATAGGCTATGGTTCAGACAAGAAGACTCGTCACTATCTCCCTAACGGTTTCAAGAAATTTGTTGTTCACAATGTGAATGACTTGGAACTGCTTATGATGCATAACAGGACTTACTGTGCTGAGATTGCTCACAATATATCAACAAGAAAGAGGAAGGAAATAGTTGAGAGAGCTGCTCAACTTGATGTTGTTGTGACAAACAAAACCGCTAGACTACGTAGCCAGGAGGATGAGTAG 402 0.4428 MAVPLLTKKIVKKRVKRFKRPQSDRKISVKPSWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNDLELLMMHNRTYCAEIAHNISTRKRKEIVERAAQLDVVVTNKTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0798 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lal19g0798 133 CDD Ribosomal_L32_L32e 18 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lal19g0798 133 PANTHER 60S RIBOSOMAL PROTEIN L32-1-LIKE 1 133 - -
Lal19g0798 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lal19g0798 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Lal19g0798 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0798 Lal-Chr19 12073392 12075320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0798 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 84.962 1.25e-84 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0798 K02912 - gmx:100787561 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0798 19 12073392 12075320 Lal19g0798 19 12073392 12075320 ECH