Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0789 ATGACATCAGAAGAAGGTGATGGTTGGCCTATAGAACTTCTTAGAAATTCTAATTCGAGTTGTGGTTTTTCGATTAGACGAGGTCACACCTACAAGCATAGCAAGAATAATGTCGATGATATTTATAAAAGAGAGTATATTTTTCACCATGATGGTATTGCTAATCAACAAAAAGTTGTTGAATTAGAAAGACAAAGGAGATGGAAAAGTTCAAAATGTAAGTGTAGCGCAAAGTTGATTATTACTAAAAGAACAATTGGTTTTGAGGAATGTTGGGTGATAACATATTTCAGTAATTCTCATAACCATACATTATTGGACAACAAAGAGGTTCGTTTCCTTCCTGCTTATCGTGACATACCTATCAATGATCAAGGTCGCATATTACTACTATCAAAAGCTGGATGTTCAGTAAGTATTATAATGAGGGTGTTTGAATTGGAGAAGGGGATAGAGGCGGGCCTTCTACCATTTTTAGAAAAAGACATTAGAAATTTTCTTCAATCTCACAGTAATGTTGGTAAATATAACGACGATTCAGAGGTTCTAAAATTATGCAAAAGTCTAAAAGATAAAGATGATGCATTACTGATGTATGTTGTAGTAAATGAACATTCTCAAATAACATACTTCACAATATCCGGAATGGCAACGGGGGCGGGCATGATCTACCATTCATGTTTAATCATCATTGATTATAGTGATAGTGCATAG 714 0.3431 MTSEEGDGWPIELLRNSNSSCGFSIRRGHTYKHSKNNVDDIYKREYIFHHDGIANQQKVVELERQRRWKSSKCKCSAKLIITKRTIGFEECWVITYFSNSHNHTLLDNKEVRFLPAYRDIPINDQGRILLLSKAGCSVSIIMRVFELEKGIEAGLLPFLEKDIRNFLQSHSNVGKYNDDSEVLKLCKSLKDKDDALLMYVVVNEHSQITYFTISGMATGAGMIYHSCLIIIDYSDSA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0789 237 Pfam FAR1 DNA-binding domain 19 106 IPR004330 -
Lal19g0789 237 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 20 195 - -
Lal19g0789 237 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 195 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0789 Lal-Chr19 12027061 12029144 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal19g0789 FAR1 1.4e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0789 - - var:108339217 249.98