Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal19g0775 ATGGATAGTAAATTAAGCAATACTAGTCCTTACGTGGATGAACAAGAATATAGTGATGTAAGAGGCCAAGAAAACTTTGTGGAGTCTTCTCCATCTTCCACCATCTATAACATTGATGGCATGGTTACTTCTTCATCCACTTCTACCTCTTCACTTAAGAGAAGGCGAGGGTCACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAAACTGAAAGTTCAATTAGCAATACTCCACCCTCAGATTCATGGGCATGGCGAAAATATGGCCAGAAACCCATCAAAGGTTCCCCTTATCCCAGAGGATACTACAGGTGTAGCAGTAACAAAGGATGTCCTGCAAGGAAACAAGTAGAAAGAAGTCGCATAGACCCCACCATACTAGTTGTTACTTATTCCTCCGACCACAACCACAACTCGCCAGTTTTCAAAAACCACCACCATCATAATCACAGTCGCCACAACAACAATAACCGCTCTTCCTCCGCCGCTGTAAAACCCATCATCAAACCAGAATCCGAAAATATCATCGCTGAATCGGTCGAACCAGACCTCATTGCTGATGCGGTTGAACCGGAGGATAAGTTTTCGGACGAGTTCGGATGGTTCGGGAAGATGAAGGTAATTACTACGACGTCGTCCACGGTTATTGAAAGTCCAATATTTGGAGGGTACGATGATGATGTAGGATCAGTGTTCGTGCCCATGAGAGAGGAGGATGAGTTATTGTTCGCTGACCTTGGGGAGCTGCCAGAGTTCTCACCGGAGTTCAAGCGGGGGTCGCTAGAGATAGCGGAGGAGTGGCGGCGATGGTGTGAGACCACAAGCTGA 828 0.465 MDSKLSNTSPYVDEQEYSDVRGQENFVESSPSSTIYNIDGMVTSSSTSTSSLKRRRGSQKRVVQIPIKETESSISNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSNKGCPARKQVERSRIDPTILVVTYSSDHNHNSPVFKNHHHHNHSRHNNNNRSSSAAVKPIIKPESENIIAESVEPDLIADAVEPEDKFSDEFGWFGKMKVITTTSSTVIESPIFGGYDDDVGSVFVPMREEDELLFADLGELPEFSPEFKRGSLEIAEEWRRWCETTS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal19g0775 275 MobiDBLite consensus disorder prediction 22 53 - -
Lal19g0775 275 MobiDBLite consensus disorder prediction 1 62 - -
Lal19g0775 275 SMART WRKY_cls 79 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g0775 275 SUPERFAMILY WRKY DNA-binding domain 76 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g0775 275 Gene3D WRKY domain 65 141 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal19g0775 275 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 22 272 IPR044810 GO:0003700
Lal19g0775 275 PANTHER OS01G0750100 PROTEIN 22 272 - -
Lal19g0775 275 MobiDBLite consensus disorder prediction 141 162 - -
Lal19g0775 275 Pfam WRKY DNA -binding domain 81 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal19g0775 275 ProSiteProfiles WRKY domain profile. 80 140 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal19g0775 Lal-Chr19 11899759 11902174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal19g0775 23 257 WRKY Transcription Factor Family AT1G29280 46.939 1.72e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal19g0775 WRKY 8.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal19g0775 - - lang:109348688 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g0775 19 11899759 11902174 Lal19g0775 19 11899759 11902174 ECH
Lal14g1217 14 14106196 14108720 Lal19g0775 19 11899759 11902174 LSH